RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ATP8B2P98198 1209 aa19.05■□□□□ 0.64
TNFSF13-202ENST00000349228 F6X3S4 739 aa19.04■□□□□ 0.64
TNFSF13-202ENST00000349228 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
TNFSF13-202ENST00000349228 ERC2O15083 957 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 PDE1AP54750 535 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 FKBP5Q13451 457 aaPredicted RBP19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 PHF8Q9UPP1 1060 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 CD2BP2O95400 341 aaKnown RBP19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 OTUD7AQ8TE49 926 aaPredicted RBP19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 IP6K1Q92551 441 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 SRCIN1Q9C0H9 1055 aa19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
TNFSF13-202ENST00000349228 GOLGA6L22H0YM25 854 aa19.02■□□□□ 0.64
TNFSF13-202ENST00000349228 ST18O60284 1047 aa19.02■□□□□ 0.64
TNFSF13-202ENST00000349228 HOXB7P09629 217 aa19.02■□□□□ 0.64
TNFSF13-202ENST00000349228 LRRCC1Q9C099 1032 aa19.02■□□□□ 0.64
TNFSF13-202ENST00000349228 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.64
TNFSF13-202ENST00000349228 MRE11P49959 708 aa19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 NUCB2P80303 420 aa19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 ANKLE2Q86XL3 938 aa19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 KCNH5Q8NCM2 988 aa19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 MARF1Q9Y4F3 1742 aaKnown RBP19.01■□□□□ 0.63
TNFSF13-202ENST00000349228 CACNA1FO60840 1977 aa19■□□□□ 0.63
TNFSF13-202ENST00000349228 AOX1Q06278 1338 aa18.99■□□□□ 0.63
TNFSF13-202ENST00000349228 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
TNFSF13-202ENST00000349228 CEMIPQ8WUJ3 1361 aa18.99■□□□□ 0.63
TNFSF13-202ENST00000349228 STAP2Q9UGK3 403 aa18.99■□□□□ 0.63
TNFSF13-202ENST00000349228 FAM208AQ9UK61 1670 aaKnown RBP18.99■□□□□ 0.63
TNFSF13-202ENST00000349228 APBB1O00213 710 aa18.98■□□□□ 0.63
TNFSF13-202ENST00000349228 IBTKQ9P2D0 1353 aaPredicted RBP18.98■□□□□ 0.63
TNFSF13-202ENST00000349228 ADGRL3Q9HAR2 1447 aa18.98■□□□□ 0.63
TNFSF13-202ENST00000349228 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
TNFSF13-202ENST00000349228 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
TNFSF13-202ENST00000349228 XRCC6P12956 609 aaKnown RBP eCLIP18.97■□□□□ 0.63
TNFSF13-202ENST00000349228 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
TNFSF13-202ENST00000349228 RAB11FIP3O75154 756 aa18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 MCM2P49736 904 aa18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 HDGFL1Q5TGJ6 251 aa18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 UBTFL1P0CB47 393 aaPredicted RBP18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 MX1P20591 662 aa18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 LTV1Q96GA3 475 aaPredicted RBP18.96■□□□□ 0.63
TNFSF13-202ENST00000349228 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
TNFSF13-202ENST00000349228 MCCP23508 829 aa18.95■□□□□ 0.62
TNFSF13-202ENST00000349228 EXOC6BQ9Y2D4 811 aa18.95■□□□□ 0.62
TNFSF13-202ENST00000349228 USP44Q9H0E7 712 aa18.95■□□□□ 0.62
TNFSF13-202ENST00000349228 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
TNFSF13-202ENST00000349228 NFAT5O94916 1531 aa18.94■□□□□ 0.62
TNFSF13-202ENST00000349228 ANAPC15P60006 121 aa18.94■□□□□ 0.62
TNFSF13-202ENST00000349228 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
TNFSF13-202ENST00000349228 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
TNFSF13-202ENST00000349228 CHD2O14647 1828 aaKnown RBP18.94■□□□□ 0.62
TNFSF13-202ENST00000349228 PSME1Q06323 249 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 EIF4A1P60842 406 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 PLEKHO1Q53GL0 409 aaPredicted RBP18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 IL17RAQ96F46 866 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
TNFSF13-202ENST00000349228 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
TNFSF13-202ENST00000349228 SSFA2P28290 1259 aa18.92■□□□□ 0.62
TNFSF13-202ENST00000349228 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
TNFSF13-202ENST00000349228 CYP2E1P05181 493 aaPredicted RBP18.91■□□□□ 0.62
TNFSF13-202ENST00000349228 GRPEL1Q9HAV7 217 aa18.91■□□□□ 0.62
TNFSF13-202ENST00000349228 POLA2Q14181 598 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 KLHL40Q2TBA0 621 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 NECTIN2Q92692 538 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 HDAC5Q9UQL6 1122 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 CHMLP26374 656 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 PDE4CQ08493 712 aa18.9■□□□□ 0.62
TNFSF13-202ENST00000349228 TEFQ10587 303 aa18.88■□□□□ 0.61
TNFSF13-202ENST00000349228 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
TNFSF13-202ENST00000349228 USHBP1Q8N6Y0 703 aa18.88■□□□□ 0.61
TNFSF13-202ENST00000349228 LTN1O94822 1766 aa18.88■□□□□ 0.61
TNFSF13-202ENST00000349228 ZNF142P52746 1687 aaPredicted RBP18.88■□□□□ 0.61
TNFSF13-202ENST00000349228 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
TNFSF13-202ENST00000349228 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
TNFSF13-202ENST00000349228 PHAXQ9H814 394 aaKnown RBP18.87■□□□□ 0.61
TNFSF13-202ENST00000349228 TRIM6-TRIM34B2RNG4 842 aa18.86■□□□□ 0.61
TNFSF13-202ENST00000349228 BEND3Q5T5X7 828 aa18.86■□□□□ 0.61
TNFSF13-202ENST00000349228 ZNF530Q6P9A1 599 aaPredicted RBP18.86■□□□□ 0.61
TNFSF13-202ENST00000349228 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 PPP1R42Q7Z4L9 355 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 RILPL2Q969X0 211 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms