RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 A0A0U1RQG5 324 aaPredicted RBP21.48■■□□□ 1.03
APP-202ENST00000348990 CCDC183Q5T5S1 534 aa21.48■■□□□ 1.03
APP-202ENST00000348990 SRCIN1Q9C0H9 1055 aa21.48■■□□□ 1.03
APP-202ENST00000348990 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
APP-202ENST00000348990 CHMLP26374 656 aa21.47■■□□□ 1.03
APP-202ENST00000348990 NUTM1Q86Y26 1132 aa21.47■■□□□ 1.03
APP-202ENST00000348990 PIBF1Q8WXW3 757 aa21.47■■□□□ 1.03
APP-202ENST00000348990 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
APP-202ENST00000348990 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
APP-202ENST00000348990 DRC7Q8IY82 874 aa21.45■■□□□ 1.02
APP-202ENST00000348990 PTPRCP08575 1304 aa21.45■■□□□ 1.02
APP-202ENST00000348990 UNC5CLQ8IV45 518 aa21.45■■□□□ 1.02
APP-202ENST00000348990 INTS4Q96HW7 963 aaKnown RBP21.45■■□□□ 1.02
APP-202ENST00000348990 ATP10DQ9P241 1426 aa21.45■■□□□ 1.02
APP-202ENST00000348990 CUL4AQ13619 759 aa21.45■■□□□ 1.02
APP-202ENST00000348990 PRIMPOLQ96LW4 560 aa21.45■■□□□ 1.02
APP-202ENST00000348990 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
APP-202ENST00000348990 VPS37CA5D8V6 355 aaPredicted RBP21.44■■□□□ 1.02
APP-202ENST00000348990 CCT4P50991 539 aaKnown RBP21.44■■□□□ 1.02
APP-202ENST00000348990 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
APP-202ENST00000348990 CAMSAP1Q5T5Y3 1602 aa21.44■■□□□ 1.02
APP-202ENST00000348990 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
APP-202ENST00000348990 PPLO60437 1756 aa21.43■■□□□ 1.02
APP-202ENST00000348990 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
APP-202ENST00000348990 PNMA6EA0A0J9YXQ4 647 aa21.43■■□□□ 1.02
APP-202ENST00000348990 IGSF3O75054 1194 aa21.43■■□□□ 1.02
APP-202ENST00000348990 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
APP-202ENST00000348990 CD163L1Q9NR16 1453 aa21.43■■□□□ 1.02
APP-202ENST00000348990 CHL1O00533 1208 aa21.43■■□□□ 1.02
APP-202ENST00000348990 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
APP-202ENST00000348990 FOXO3O43524 673 aa21.42■■□□□ 1.02
APP-202ENST00000348990 CPA1P15085 419 aa21.42■■□□□ 1.02
APP-202ENST00000348990 UVSSAQ2YD98 709 aa21.42■■□□□ 1.02
APP-202ENST00000348990 EIF4A2Q14240 407 aaKnown RBP21.41■■□□□ 1.02
APP-202ENST00000348990 PDCL2Q8N4E4 241 aa21.41■■□□□ 1.02
APP-202ENST00000348990 LRRFIP2Q9Y608 721 aaKnown RBP21.41■■□□□ 1.02
APP-202ENST00000348990 ARAP3Q8WWN8 1544 aa21.41■■□□□ 1.02
APP-202ENST00000348990 NUDT16Q96DE0 195 aaKnown RBP21.4■■□□□ 1.02
APP-202ENST00000348990 STX6O43752 255 aa21.4■■□□□ 1.02
APP-202ENST00000348990 SURF6O75683 361 aaKnown RBP21.4■■□□□ 1.02
APP-202ENST00000348990 ANAPC15P60006 121 aa21.4■■□□□ 1.02
APP-202ENST00000348990 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
APP-202ENST00000348990 KDM4AO75164 1064 aa21.4■■□□□ 1.02
APP-202ENST00000348990 ABCC3O15438 1527 aa21.4■■□□□ 1.02
APP-202ENST00000348990 ARHGEF28Q8N1W1 1705 aaKnown RBP21.39■■□□□ 1.02
APP-202ENST00000348990 ZSCAN22P10073 491 aaPredicted RBP21.39■■□□□ 1.02
APP-202ENST00000348990 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.02
APP-202ENST00000348990 OSBPL3Q9H4L5 887 aa21.39■■□□□ 1.02
APP-202ENST00000348990 ARHGAP31Q2M1Z3 1444 aa21.39■■□□□ 1.02
APP-202ENST00000348990 GNAI3P08754 354 aa21.39■■□□□ 1.01
APP-202ENST00000348990 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
APP-202ENST00000348990 CWC27Q6UX04 472 aaKnown RBP21.39■■□□□ 1.01
APP-202ENST00000348990 ATP6V1DQ9Y5K8 247 aa21.39■■□□□ 1.01
APP-202ENST00000348990 SYT1P21579 422 aa21.39■■□□□ 1.01
APP-202ENST00000348990 UBE2HP62256 183 aa21.39■■□□□ 1.01
APP-202ENST00000348990 CCDC83Q8IWF9 413 aa21.39■■□□□ 1.01
APP-202ENST00000348990 SPG7Q9UQ90 795 aa21.39■■□□□ 1.01
APP-202ENST00000348990 LETM1O95202 739 aaPredicted RBP21.38■■□□□ 1.01
APP-202ENST00000348990 CAMK4Q16566 473 aa21.38■■□□□ 1.01
APP-202ENST00000348990 BCL2L12Q9HB09 334 aa21.38■■□□□ 1.01
APP-202ENST00000348990 DIAPH3Q9NSV4 1193 aa21.38■■□□□ 1.01
APP-202ENST00000348990 ZNF710Q8N1W2 664 aa21.38■■□□□ 1.01
APP-202ENST00000348990 GOLGA6L6A8MZA4 724 aa21.37■■□□□ 1.01
APP-202ENST00000348990 KCNJ4P48050 445 aa21.37■■□□□ 1.01
APP-202ENST00000348990 DNM1Q05193 864 aaKnown RBP21.37■■□□□ 1.01
APP-202ENST00000348990 MLECQ14165 292 aa21.37■■□□□ 1.01
APP-202ENST00000348990 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.37■■□□□ 1.01
APP-202ENST00000348990 LMTK2Q8IWU2 1503 aa21.37■■□□□ 1.01
APP-202ENST00000348990 GOLGA6L4A6NEF3 574 aa21.37■■□□□ 1.01
APP-202ENST00000348990 WASLO00401 505 aaPredicted RBP21.37■■□□□ 1.01
APP-202ENST00000348990 IL25Q9H293 177 aa21.37■■□□□ 1.01
APP-202ENST00000348990 AK2P54819 239 aa21.36■■□□□ 1.01
APP-202ENST00000348990 FERMT3Q86UX7 667 aa21.36■■□□□ 1.01
APP-202ENST00000348990 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
APP-202ENST00000348990 PYCARDQ9ULZ3 195 aa21.36■■□□□ 1.01
APP-202ENST00000348990 UBTFL1P0CB47 393 aaPredicted RBP21.36■■□□□ 1.01
APP-202ENST00000348990 CASTP20810 708 aaKnown RBP21.36■■□□□ 1.01
APP-202ENST00000348990 RIOK3O14730 519 aaKnown RBP21.35■■□□□ 1.01
APP-202ENST00000348990 ATP2B3Q16720 1220 aa21.35■■□□□ 1.01
APP-202ENST00000348990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.35■■□□□ 1.01
APP-202ENST00000348990 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
APP-202ENST00000348990 FLIIQ13045 1269 aa21.34■■□□□ 1.01
APP-202ENST00000348990 PTPRMP28827 1452 aa21.34■■□□□ 1.01
APP-202ENST00000348990 LIMCH1Q9UPQ0 1083 aa21.34■■□□□ 1.01
APP-202ENST00000348990 REREQ9P2R6 1566 aa21.34■■□□□ 1.01
APP-202ENST00000348990 F13A1P00488 732 aa21.34■■□□□ 1.01
APP-202ENST00000348990 U2AF2P26368 475 aaKnown RBP eCLIP21.34■■□□□ 1.01
APP-202ENST00000348990 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
APP-202ENST00000348990 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1.01
APP-202ENST00000348990 ZNF592Q92610 1267 aa21.33■■□□□ 1.01
APP-202ENST00000348990 DMTNQ08495 405 aa21.33■■□□□ 1
APP-202ENST00000348990 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
APP-202ENST00000348990 CCDC192P0DO97 292 aa21.32■■□□□ 1
APP-202ENST00000348990 GJB2P29033 226 aa21.32■■□□□ 1
APP-202ENST00000348990 CKAP2LQ8IYA6 745 aa21.32■■□□□ 1
APP-202ENST00000348990 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
APP-202ENST00000348990 ABCA9Q8IUA7 1624 aa21.32■■□□□ 1
APP-202ENST00000348990 RGS12O14924 1447 aa21.32■■□□□ 1
APP-202ENST00000348990 ZSCAN20P17040 1043 aaPredicted RBP21.31■■□□□ 1
APP-202ENST00000348990 RASEFQ8IZ41 740 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms