RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 A0A087WZG4 1122 aa21.97■■□□□ 1.11
UBE3C-201ENST00000348165 IMMTQ16891 758 aaKnown RBP21.97■■□□□ 1.11
UBE3C-201ENST00000348165 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
UBE3C-201ENST00000348165 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
UBE3C-201ENST00000348165 IFIT1P09914 478 aaKnown RBP21.97■■□□□ 1.11
UBE3C-201ENST00000348165 PRPF40BQ6NWY9 871 aaKnown RBP21.97■■□□□ 1.11
UBE3C-201ENST00000348165 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 IFIT5Q13325 482 aaKnown RBP21.96■■□□□ 1.11
UBE3C-201ENST00000348165 GPTP24298 496 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 EXOC5O00471 708 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 CDKL5O76039 1030 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 CCDC192P0DO97 292 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 SPATA32Q96LK8 384 aa21.96■■□□□ 1.11
UBE3C-201ENST00000348165 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.11
UBE3C-201ENST00000348165 NKTRP30414 1462 aaKnown RBP21.95■■□□□ 1.1
UBE3C-201ENST00000348165 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
UBE3C-201ENST00000348165 FERMT3Q86UX7 667 aa21.95■■□□□ 1.1
UBE3C-201ENST00000348165 SERPINC1P01008 464 aa21.94■■□□□ 1.1
UBE3C-201ENST00000348165 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
UBE3C-201ENST00000348165 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
UBE3C-201ENST00000348165 NOL7Q9UMY1 257 aaKnown RBP21.93■■□□□ 1.1
UBE3C-201ENST00000348165 CCDC66A2RUB6 948 aa21.93■■□□□ 1.1
UBE3C-201ENST00000348165 CALRP27797 417 aaKnown RBP21.93■■□□□ 1.1
UBE3C-201ENST00000348165 ANXA1P04083 346 aa21.93■■□□□ 1.1
UBE3C-201ENST00000348165 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
UBE3C-201ENST00000348165 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
UBE3C-201ENST00000348165 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 SSBP05455 408 aaKnown RBP eCLIP21.92■■□□□ 1.1
UBE3C-201ENST00000348165 U3KPZ7 1027 aaPredicted RBP21.92■■□□□ 1.1
UBE3C-201ENST00000348165 HSP90AB2PQ58FF8 381 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 CAGE1Q8TC20 777 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 ATP5J2-PTCD1G3V325 749 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 MBIPQ9NS73 344 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 CCDC83Q8IWF9 413 aa21.92■■□□□ 1.1
UBE3C-201ENST00000348165 ARGLU1Q9NWB6 273 aaPredicted RBP21.92■■□□□ 1.1
UBE3C-201ENST00000348165 RUFY1Q96T51 708 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 PIP4K2AP48426 406 aaPredicted RBP21.91■■□□□ 1.1
UBE3C-201ENST00000348165 ANKRD24Q8TF21 1146 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 ANKIB1Q9P2G1 1089 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 CFAP45Q9UL16 551 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 USP5P45974 858 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 SMARCE1Q969G3 411 aa21.91■■□□□ 1.1
UBE3C-201ENST00000348165 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
UBE3C-201ENST00000348165 NOM1Q5C9Z4 860 aaKnown RBP21.9■■□□□ 1.1
UBE3C-201ENST00000348165 MAP3K2Q9Y2U5 619 aa21.9■■□□□ 1.1
UBE3C-201ENST00000348165 PI4KAP2A4QPH2 592 aa21.9■■□□□ 1.1
UBE3C-201ENST00000348165 PI4KAP1Q8N8J0 262 aa21.9■■□□□ 1.1
UBE3C-201ENST00000348165 MCM4P33991 863 aa21.9■■□□□ 1.1
UBE3C-201ENST00000348165 CADPS2Q86UW7 1296 aa21.9■■□□□ 1.1
UBE3C-201ENST00000348165 UBE2Q2Q8WVN8 375 aa21.89■■□□□ 1.09
UBE3C-201ENST00000348165 NAPBQ9H115 298 aa21.89■■□□□ 1.09
UBE3C-201ENST00000348165 CIZ1Q9ULV3 898 aaPredicted RBP21.89■■□□□ 1.09
UBE3C-201ENST00000348165 HSP90AB3PQ58FF7 597 aa21.88■■□□□ 1.09
UBE3C-201ENST00000348165 TNRQ92752 1358 aa21.88■■□□□ 1.09
UBE3C-201ENST00000348165 CCDC173Q0VFZ6 552 aa21.88■■□□□ 1.09
UBE3C-201ENST00000348165 STIM1Q13586 685 aa21.88■■□□□ 1.09
UBE3C-201ENST00000348165 RBM10P98175 930 aaKnown RBP21.87■■□□□ 1.09
UBE3C-201ENST00000348165 JARID2Q92833 1246 aaPredicted RBP21.87■■□□□ 1.09
UBE3C-201ENST00000348165 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
UBE3C-201ENST00000348165 KDM5BQ9UGL1 1544 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 TMOD2Q9NZR1 351 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 NSD2O96028 1365 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 POLR3DP05423 398 aaPredicted RBP21.87■■□□□ 1.09
UBE3C-201ENST00000348165 UBE3BQ7Z3V4 1068 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 CCDC82Q8N4S0 544 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 PTPRCP08575 1304 aa21.87■■□□□ 1.09
UBE3C-201ENST00000348165 ANKRD18BA2A2Z9 1011 aa21.86■■□□□ 1.09
UBE3C-201ENST00000348165 MPHOSPH10O00566 681 aaKnown RBP21.86■■□□□ 1.09
UBE3C-201ENST00000348165 MKNK2Q9HBH9 465 aa21.86■■□□□ 1.09
UBE3C-201ENST00000348165 MAP3K12Q12852 859 aa21.86■■□□□ 1.09
UBE3C-201ENST00000348165 TANGO6Q9C0B7 1094 aa21.86■■□□□ 1.09
UBE3C-201ENST00000348165 NUP62CLQ9H1M0 184 aa21.85■■□□□ 1.09
UBE3C-201ENST00000348165 FBXO3Q9UK99 471 aa21.85■■□□□ 1.09
UBE3C-201ENST00000348165 PATL2C9JE40 543 aaKnown RBP21.85■■□□□ 1.09
UBE3C-201ENST00000348165 HSP90B2PQ58FF3 399 aa21.85■■□□□ 1.09
UBE3C-201ENST00000348165 DZIP1Q86YF9 867 aaKnown RBP21.85■■□□□ 1.09
UBE3C-201ENST00000348165 ZNHIT6Q9NWK9 470 aaKnown RBP21.85■■□□□ 1.09
UBE3C-201ENST00000348165 WASF1Q92558 559 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 SNRKQ9NRH2 765 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 LDHAL6AQ6ZMR3 332 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 ATP10BO94823 1461 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 SYCP1Q15431 976 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 PPFIBP1Q86W92 1011 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 DACH1Q9UI36 760 aa21.84■■□□□ 1.09
UBE3C-201ENST00000348165 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
UBE3C-201ENST00000348165 SLC5A1P13866 664 aa21.83■■□□□ 1.09
UBE3C-201ENST00000348165 ZNF76P36508 570 aa21.83■■□□□ 1.09
UBE3C-201ENST00000348165 PPP1R42Q7Z4L9 355 aa21.83■■□□□ 1.09
UBE3C-201ENST00000348165 TSHZ3Q63HK5 1081 aa21.83■■□□□ 1.08
UBE3C-201ENST00000348165 LARP6Q9BRS8 491 aaKnown RBP21.83■■□□□ 1.08
UBE3C-201ENST00000348165 BMP2KQ9NSY1 1161 aaPredicted RBP21.83■■□□□ 1.08
UBE3C-201ENST00000348165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.83■■□□□ 1.085e-7■■■■■ 51.5
UBE3C-201ENST00000348165 RANBP6O60518 1105 aaKnown RBP21.82■■□□□ 1.08
UBE3C-201ENST00000348165 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
UBE3C-201ENST00000348165 PDCL3Q9H2J4 239 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 ECHDC1Q9NTX5 307 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 AK7Q96M32 723 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 GRPEL1Q9HAV7 217 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms