RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 FBXO41Q8TF61 875 aa31.95■■■□□ 2.7
TRADD-201ENST00000345057 VIRMAQ69YN4 1812 aaKnown RBP31.94■■■□□ 2.7
TRADD-201ENST00000345057 ZBTB7BO15156 539 aaPredicted RBP31.93■■■□□ 2.7
TRADD-201ENST00000345057 INTS3Q68E01 1043 aaKnown RBP31.93■■■□□ 2.7
TRADD-201ENST00000345057 IFNL2Q8IZJ0 200 aa31.93■■■□□ 2.7
TRADD-201ENST00000345057 CACNA1FO60840 1977 aa31.93■■■□□ 2.7
TRADD-201ENST00000345057 PKD1L3Q7Z443 1732 aa31.93■■■□□ 2.7
TRADD-201ENST00000345057 HSP90AB1P08238 724 aaKnown RBP31.92■■■□□ 2.7
TRADD-201ENST00000345057 EIF4A1P60842 406 aaKnown RBP31.91■■■□□ 2.7
TRADD-201ENST00000345057 PHKG2P15735 406 aa31.91■■■□□ 2.7
TRADD-201ENST00000345057 TOM1L2Q6ZVM7 507 aa31.91■■■□□ 2.7
TRADD-201ENST00000345057 PARP4Q9UKK3 1724 aaKnown RBP31.9■■■□□ 2.7
TRADD-201ENST00000345057 RGS12O14924 1447 aa31.9■■■□□ 2.7
TRADD-201ENST00000345057 PIP4K2BP78356 416 aa31.89■■■□□ 2.7
TRADD-201ENST00000345057 SIPA1L3O60292 1781 aaPredicted RBP31.88■■■□□ 2.69
TRADD-201ENST00000345057 CARD10Q9BWT7 1032 aa31.87■■■□□ 2.69
TRADD-201ENST00000345057 COL22A1Q8NFW1 1626 aaPredicted RBP31.87■■■□□ 2.69
TRADD-201ENST00000345057 HDGFL1Q5TGJ6 251 aa31.86■■■□□ 2.69
TRADD-201ENST00000345057 SCN11AQ9UI33 1791 aa31.86■■■□□ 2.69
TRADD-201ENST00000345057 DCAF5Q96JK2 942 aa31.85■■■□□ 2.69
TRADD-201ENST00000345057 EVA1CP58658 441 aa31.84■■■□□ 2.69
TRADD-201ENST00000345057 CCT4P50991 539 aaKnown RBP31.84■■■□□ 2.69
TRADD-201ENST00000345057 FLIIQ13045 1269 aa31.82■■■□□ 2.69
TRADD-201ENST00000345057 SLC52A2Q9HAB3 445 aa31.82■■■□□ 2.69
TRADD-201ENST00000345057 KDM6AO15550 1401 aaPredicted RBP31.81■■■□□ 2.68
TRADD-201ENST00000345057 PCDH11XQ9BZA7 1347 aa31.81■■■□□ 2.68
TRADD-201ENST00000345057 PCDH11YQ9BZA8 1340 aa31.81■■■□□ 2.68
TRADD-201ENST00000345057 MRC1P22897 1456 aa31.81■■■□□ 2.68
TRADD-201ENST00000345057 PDE4AP27815 886 aa31.8■■■□□ 2.68
TRADD-201ENST00000345057 COL14A1Q05707 1796 aaKnown RBP31.8■■■□□ 2.68
TRADD-201ENST00000345057 RGS3P49796 1198 aa31.8■■■□□ 2.68
TRADD-201ENST00000345057 HEG1Q9ULI3 1381 aa31.79■■■□□ 2.68
TRADD-201ENST00000345057 G2E3Q7L622 706 aa31.79■■■□□ 2.68
TRADD-201ENST00000345057 ILDR1Q86SU0 546 aaPredicted RBP31.79■■■□□ 2.68
TRADD-201ENST00000345057 IL2RBP14784 551 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 FKBP5Q13451 457 aaPredicted RBP31.78■■■□□ 2.68
TRADD-201ENST00000345057 SMC5Q8IY18 1101 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 CYP27B1O15528 508 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 SKAP1Q86WV1 359 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 ZCRB1Q8TBF4 217 aaKnown RBP31.78■■■□□ 2.68
TRADD-201ENST00000345057 BACH2Q9BYV9 841 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 PXDNLA1KZ92 1463 aa31.78■■■□□ 2.68
TRADD-201ENST00000345057 PDZRN3Q9UPQ7 1066 aa31.77■■■□□ 2.68
TRADD-201ENST00000345057 STRN4Q9NRL3 753 aa31.76■■■□□ 2.68
TRADD-201ENST00000345057 KCNQ3O43525 872 aa31.76■■■□□ 2.67
TRADD-201ENST00000345057 NECTIN2Q92692 538 aa31.75■■■□□ 2.67
TRADD-201ENST00000345057 GIGYF1O75420 1035 aaPredicted RBP31.74■■■□□ 2.67
TRADD-201ENST00000345057 GCC1Q96CN9 775 aa31.74■■■□□ 2.67
TRADD-201ENST00000345057 EIF2S2P20042 333 aaKnown RBP31.74■■■□□ 2.67
TRADD-201ENST00000345057 ZNF790Q6PG37 636 aa31.74■■■□□ 2.67
TRADD-201ENST00000345057 LARP1Q6PKG0 1096 aaKnown RBP31.74■■■□□ 2.67
TRADD-201ENST00000345057 PHLPP1O60346 1717 aa31.73■■■□□ 2.67
TRADD-201ENST00000345057 DBF4Q9UBU7 674 aaPredicted RBP31.73■■■□□ 2.67
TRADD-201ENST00000345057 FAM161AQ3B820 660 aa31.72■■■□□ 2.67
TRADD-201ENST00000345057 SLC4A10Q6U841 1118 aa31.72■■■□□ 2.67
TRADD-201ENST00000345057 BTG4Q9NY30 223 aa31.72■■■□□ 2.67
TRADD-201ENST00000345057 RPAP2Q8IXW5 612 aaPredicted RBP31.71■■■□□ 2.67
TRADD-201ENST00000345057 NFATC2IPQ8NCF5 419 aa31.71■■■□□ 2.67
TRADD-201ENST00000345057 N4BP2Q86UW6 1770 aaPredicted RBP31.7■■■□□ 2.67
TRADD-201ENST00000345057 COL16A1Q07092 1604 aaPredicted RBP31.7■■■□□ 2.66
TRADD-201ENST00000345057 CABP4P57796 275 aa31.69■■■□□ 2.66
TRADD-201ENST00000345057 TTC5Q8N0Z6 440 aa31.69■■■□□ 2.66
TRADD-201ENST00000345057 C1orf115Q9H7X2 142 aa31.69■■■□□ 2.66
TRADD-201ENST00000345057 F6X3S4 739 aa31.68■■■□□ 2.66
TRADD-201ENST00000345057 CHPF2Q9P2E5 772 aa31.68■■■□□ 2.66
TRADD-201ENST00000345057 NKX1-1Q15270 411 aaPredicted RBP31.67■■■□□ 2.66
TRADD-201ENST00000345057 ERVV-2B6SEH9 535 aa31.66■■■□□ 2.66
TRADD-201ENST00000345057 GNAI3P08754 354 aa31.65■■■□□ 2.66
TRADD-201ENST00000345057 NUCB1Q02818 461 aa31.65■■■□□ 2.66
TRADD-201ENST00000345057 ANKRD44Q8N8A2 993 aa31.65■■■□□ 2.66
TRADD-201ENST00000345057 HYPKQ9NX55 129 aa31.64■■■□□ 2.66
TRADD-201ENST00000345057 MEIS3Q99687 375 aa31.63■■■□□ 2.65
TRADD-201ENST00000345057 PHAXQ9H814 394 aaKnown RBP31.63■■■□□ 2.65
TRADD-201ENST00000345057 FMNL2Q96PY5 1086 aa31.62■■■□□ 2.65
TRADD-201ENST00000345057 ATP10DQ9P241 1426 aa31.62■■■□□ 2.65
TRADD-201ENST00000345057 SIRT2Q8IXJ6 389 aa31.61■■■□□ 2.65
TRADD-201ENST00000345057 HMMRO75330 724 aa31.61■■■□□ 2.65
TRADD-201ENST00000345057 HSPA1LP34931 641 aa31.61■■■□□ 2.65
TRADD-201ENST00000345057 SLC39A6Q13433 755 aa31.61■■■□□ 2.65
TRADD-201ENST00000345057 GNAI2P04899 355 aa31.6■■■□□ 2.65
TRADD-201ENST00000345057 SHANK3Q9BYB0 1731 aa31.59■■■□□ 2.65
TRADD-201ENST00000345057 SNRPA1P09661 255 aaKnown RBP31.59■■■□□ 2.65
TRADD-201ENST00000345057 CEP85Q6P2H3 762 aa31.59■■■□□ 2.65
TRADD-201ENST00000345057 CHD1LQ86WJ1 897 aa31.59■■■□□ 2.65
TRADD-201ENST00000345057 DDX21Q9NR30 783 aaKnown RBP eCLIP31.59■■■□□ 2.65
TRADD-201ENST00000345057 PLCH1Q4KWH8 1693 aa31.59■■■□□ 2.65
TRADD-201ENST00000345057 ANP32AP39687 249 aaKnown RBP31.59■■■□□ 2.65
TRADD-201ENST00000345057 C8orf34Q49A92 452 aa31.59■■■□□ 2.65
TRADD-201ENST00000345057 DNAAF4Q8WXU2 420 aa31.58■■■□□ 2.65
TRADD-201ENST00000345057 SRCIN1Q9C0H9 1055 aa31.57■■■□□ 2.64
TRADD-201ENST00000345057 DDX58O95786 925 aaKnown RBP31.57■■■□□ 2.64
TRADD-201ENST00000345057 ZNF496Q96IT1 587 aaPredicted RBP31.57■■■□□ 2.64
TRADD-201ENST00000345057 DCTPP1Q9H773 170 aa31.57■■■□□ 2.64
TRADD-201ENST00000345057 DDX54Q8TDD1 881 aaKnown RBP31.56■■■□□ 2.64
TRADD-201ENST00000345057 DISP2A7MBM2 1401 aa31.55■■■□□ 2.64
TRADD-201ENST00000345057 USP35Q9P2H5 1018 aa31.55■■■□□ 2.64
TRADD-201ENST00000345057 PI4KAP2A4QPH2 592 aa31.54■■■□□ 2.64
TRADD-201ENST00000345057 PI4KAP1Q8N8J0 262 aa31.54■■■□□ 2.64
TRADD-201ENST00000345057 C5P01031 1676 aa31.53■■■□□ 2.64
TRADD-201ENST00000345057 ANKRD45Q5TZF3 282 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms