RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 GPTP24298 496 aa17.85■□□□□ 0.45
RUNX1-202ENST00000344691 DZIP1Q86YF9 867 aaKnown RBP17.85■□□□□ 0.45
RUNX1-202ENST00000344691 TRMT1Q9NXH9 659 aaKnown RBP17.85■□□□□ 0.45
RUNX1-202ENST00000344691 GOLGA6L7A0A1B0GV03 622 aa17.85■□□□□ 0.45
RUNX1-202ENST00000344691 NUP62CLQ9H1M0 184 aa17.85■□□□□ 0.45
RUNX1-202ENST00000344691 ANKRD1Q15327 319 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 PANK2Q9BZ23 570 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 CACNA2D4Q7Z3S7 1137 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 ZNF354CQ86Y25 554 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
RUNX1-202ENST00000344691 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.45
RUNX1-202ENST00000344691 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.45
RUNX1-202ENST00000344691 POLR3GO15318 223 aaPredicted RBP17.83■□□□□ 0.45
RUNX1-202ENST00000344691 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.45
RUNX1-202ENST00000344691 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.45
RUNX1-202ENST00000344691 IMMTQ16891 758 aaKnown RBP17.83■□□□□ 0.44
RUNX1-202ENST00000344691 ARHGAP29Q52LW3 1261 aa17.83■□□□□ 0.44
RUNX1-202ENST00000344691 ZNF397Q8NF99 534 aaPredicted RBP17.83■□□□□ 0.44
RUNX1-202ENST00000344691 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
RUNX1-202ENST00000344691 TMCO5BA8MYB1 307 aa17.82■□□□□ 0.44
RUNX1-202ENST00000344691 SAMM50Q9Y512 469 aa17.82■□□□□ 0.44
RUNX1-202ENST00000344691 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
RUNX1-202ENST00000344691 CBFA2T2O43439 604 aa17.82■□□□□ 0.44
RUNX1-202ENST00000344691 GRPEL1Q9HAV7 217 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 CASQ1P31415 396 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 CBX1P83916 185 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 BIN1O00499 593 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 CTNNA2P26232 953 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 PPP4R3AQ6IN85 833 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 SMC1AQ14683 1233 aaKnown RBP17.81■□□□□ 0.44
RUNX1-202ENST00000344691 TNIP1Q15025 636 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 CEP63Q96MT8 703 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
RUNX1-202ENST00000344691 VTI1AQ96AJ9 217 aa17.81■□□□□ 0.44
RUNX1-202ENST00000344691 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 CCDC91Q7Z6B0 441 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 IFFO1Q0D2I5 559 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
RUNX1-202ENST00000344691 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
RUNX1-202ENST00000344691 TDRD12Q587J7 1177 aaKnown RBP17.8■□□□□ 0.44
RUNX1-202ENST00000344691 FERMT2Q96AC1 680 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 EIF3JO75822 258 aaKnown RBP17.8■□□□□ 0.44
RUNX1-202ENST00000344691 RNF187Q5TA31 235 aaPredicted RBP17.8■□□□□ 0.44
RUNX1-202ENST00000344691 MCM2P49736 904 aa17.8■□□□□ 0.44
RUNX1-202ENST00000344691 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
RUNX1-202ENST00000344691 CDKL5O76039 1030 aa17.79■□□□□ 0.44
RUNX1-202ENST00000344691 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
RUNX1-202ENST00000344691 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
RUNX1-202ENST00000344691 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
RUNX1-202ENST00000344691 ARL1P40616 181 aaPredicted RBP17.79■□□□□ 0.44
RUNX1-202ENST00000344691 SPA17Q15506 151 aa17.79■□□□□ 0.44
RUNX1-202ENST00000344691 TMCO3Q6UWJ1 677 aa17.79■□□□□ 0.44
RUNX1-202ENST00000344691 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 TCERG1LQ5VWI1 586 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 DPH6Q7L8W6 267 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 RGS22Q8NE09 1264 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 F6X3S4 739 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 RPGRQ92834 1020 aaKnown RBP17.78■□□□□ 0.44
RUNX1-202ENST00000344691 ERLIN1O75477 346 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 NUP88Q99567 741 aaPredicted RBP17.78■□□□□ 0.44
RUNX1-202ENST00000344691 NAPBQ9H115 298 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■□ 22.6
RUNX1-202ENST00000344691 CKAP2LQ8IYA6 745 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 F8W031 263 aaPredicted RBP17.78■□□□□ 0.44
RUNX1-202ENST00000344691 HSP90AA4PQ58FG1 418 aa17.78■□□□□ 0.44
RUNX1-202ENST00000344691 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.44
RUNX1-202ENST00000344691 GDPD2Q9HCC8 539 aa17.77■□□□□ 0.44
RUNX1-202ENST00000344691 URI1O94763 535 aaPredicted RBP17.77■□□□□ 0.44
RUNX1-202ENST00000344691 FEZ1Q99689 392 aa17.77■□□□□ 0.44
RUNX1-202ENST00000344691 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.43
RUNX1-202ENST00000344691 NLRP5P59047 1200 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 HAND2P61296 217 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 LUZP1Q86V48 1076 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 STARD3NLO95772 234 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 PPP1R12BO60237 982 aaPredicted RBP17.76■□□□□ 0.43
RUNX1-202ENST00000344691 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
RUNX1-202ENST00000344691 GIMAP7Q8NHV1 300 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
RUNX1-202ENST00000344691 ATP2C2O75185 946 aa17.75■□□□□ 0.43
RUNX1-202ENST00000344691 KIF20AO95235 890 aa17.75■□□□□ 0.43
RUNX1-202ENST00000344691 TSG101Q99816 390 aa17.75■□□□□ 0.43
RUNX1-202ENST00000344691 CRACR2AQ9BSW2 395 aa17.75■□□□□ 0.43
RUNX1-202ENST00000344691 ZSWIM4Q9H7M6 989 aa17.75■□□□□ 0.43
RUNX1-202ENST00000344691 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
RUNX1-202ENST00000344691 NOP2P46087 812 aaKnown RBP17.74■□□□□ 0.43
RUNX1-202ENST00000344691 LMAN1P49257 510 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 CCDC150Q8NCX0 1101 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 APBB1IPQ7Z5R6 666 aaPredicted RBP17.74■□□□□ 0.43
RUNX1-202ENST00000344691 SNRKQ9NRH2 765 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 KIF4BQ2VIQ3 1234 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 PRC1O43663 620 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 SYCP3Q8IZU3 236 aa17.74■□□□□ 0.43
RUNX1-202ENST00000344691 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.43
RUNX1-202ENST00000344691 IQCEQ6IPM2 695 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms