RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 C4BP0C0L5 1744 aa26.97■■□□□ 1.91
CEACAM3-201ENST00000344550 SYT17Q9BSW7 474 aa26.97■■□□□ 1.91
CEACAM3-201ENST00000344550 SSFA2P28290 1259 aa26.96■■□□□ 1.91
CEACAM3-201ENST00000344550 ATP6V1AP38606 617 aa26.96■■□□□ 1.91
CEACAM3-201ENST00000344550 FHDC1Q9C0D6 1143 aaPredicted RBP26.96■■□□□ 1.91
CEACAM3-201ENST00000344550 HMOX1P09601 288 aa26.95■■□□□ 1.9
CEACAM3-201ENST00000344550 MSH5O43196 834 aa26.93■■□□□ 1.9
CEACAM3-201ENST00000344550 RC3H1Q5TC82 1133 aaKnown RBP26.93■■□□□ 1.9
CEACAM3-201ENST00000344550 NFATC2IPQ8NCF5 419 aa26.92■■□□□ 1.9
CEACAM3-201ENST00000344550 LINC00116Q8NCU8 138 aa26.92■■□□□ 1.9
CEACAM3-201ENST00000344550 NUDCQ9Y266 331 aa26.92■■□□□ 1.9
CEACAM3-201ENST00000344550 ITPK1Q13572 414 aa26.91■■□□□ 1.9
CEACAM3-201ENST00000344550 U2SURPO15042 1029 aaKnown RBP26.9■■□□□ 1.9
CEACAM3-201ENST00000344550 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
CEACAM3-201ENST00000344550 SCN11AQ9UI33 1791 aa26.89■■□□□ 1.9
CEACAM3-201ENST00000344550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.89■■□□□ 1.9
CEACAM3-201ENST00000344550 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.9
CEACAM3-201ENST00000344550 SLC52A2Q9HAB3 445 aa26.89■■□□□ 1.9
CEACAM3-201ENST00000344550 UBR3Q6ZT12 1888 aa26.88■■□□□ 1.89
CEACAM3-201ENST00000344550 ADRA2BP18089 450 aa26.88■■□□□ 1.89
CEACAM3-201ENST00000344550 GAS2L2Q8NHY3 880 aa26.88■■□□□ 1.89
CEACAM3-201ENST00000344550 RBM42Q9BTD8 480 aaKnown RBP26.88■■□□□ 1.89
CEACAM3-201ENST00000344550 CNTNAP4Q9C0A0 1308 aa26.88■■□□□ 1.89
CEACAM3-201ENST00000344550 RNMTO43148 476 aaKnown RBP26.87■■□□□ 1.89
CEACAM3-201ENST00000344550 CNGB1Q14028 1251 aaPredicted RBP26.87■■□□□ 1.89
CEACAM3-201ENST00000344550 MRC1P22897 1456 aa26.87■■□□□ 1.89
CEACAM3-201ENST00000344550 GNPATO15228 680 aa26.86■■□□□ 1.89
CEACAM3-201ENST00000344550 SLC4A9Q96Q91 983 aa26.86■■□□□ 1.89
CEACAM3-201ENST00000344550 ADAMTS7Q9UKP4 1686 aa26.85■■□□□ 1.89
CEACAM3-201ENST00000344550 RTCBQ9Y3I0 505 aaKnown RBP26.85■■□□□ 1.89
CEACAM3-201ENST00000344550 LGR6Q9HBX8 967 aa26.83■■□□□ 1.89
CEACAM3-201ENST00000344550 CICQ96RK0 1608 aaPredicted RBP26.83■■□□□ 1.88
CEACAM3-201ENST00000344550 FCHSD2O94868 740 aa26.82■■□□□ 1.88
CEACAM3-201ENST00000344550 GNAT3A8MTJ3 354 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 PTCD1O75127 700 aaKnown RBP26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 RPS6KA4O75676 772 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 PHF14O94880 888 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 TRAPPC3LQ5T215 181 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 AMIGO3Q86WK7 504 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 CD2APQ9Y5K6 639 aa26.81■■□□□ 1.88
CEACAM3-201ENST00000344550 RSPH6AQ9H0K4 717 aa26.8■■□□□ 1.88
CEACAM3-201ENST00000344550 COL5A3P25940 1745 aaPredicted RBP26.79■■□□□ 1.88
CEACAM3-201ENST00000344550 VSIG10Q8N0Z9 540 aa26.79■■□□□ 1.88
CEACAM3-201ENST00000344550 MSL1Q68DK7 614 aa26.78■■□□□ 1.88
CEACAM3-201ENST00000344550 U2AF1L5P0DN76 240 aaPredicted RBP26.77■■□□□ 1.88
CEACAM3-201ENST00000344550 PRKAR2BP31323 418 aa26.77■■□□□ 1.88
CEACAM3-201ENST00000344550 U2AF1Q01081 240 aaKnown RBP eCLIP26.77■■□□□ 1.88
CEACAM3-201ENST00000344550 NLGN1Q8N2Q7 840 aa26.77■■□□□ 1.88
CEACAM3-201ENST00000344550 TEFQ10587 303 aa26.75■■□□□ 1.87
CEACAM3-201ENST00000344550 YY1P25490 414 aa26.74■■□□□ 1.87
CEACAM3-201ENST00000344550 CRKLP46109 303 aaKnown RBP26.74■■□□□ 1.87
CEACAM3-201ENST00000344550 RALBP1Q15311 655 aa26.74■■□□□ 1.87
CEACAM3-201ENST00000344550 IL17REQ8NFR9 667 aa26.74■■□□□ 1.87
CEACAM3-201ENST00000344550 CEMIPQ8WUJ3 1361 aa26.73■■□□□ 1.87
CEACAM3-201ENST00000344550 RFC4P35249 363 aa26.73■■□□□ 1.87
CEACAM3-201ENST00000344550 KLHL34Q8N239 644 aa26.73■■□□□ 1.87
CEACAM3-201ENST00000344550 ARHGEF1Q92888 912 aaKnown RBP26.73■■□□□ 1.87
CEACAM3-201ENST00000344550 HTATSF1O43719 755 aaKnown RBP26.72■■□□□ 1.87
CEACAM3-201ENST00000344550 PHACTR3Q96KR7 559 aa26.72■■□□□ 1.87
CEACAM3-201ENST00000344550 VIRMAQ69YN4 1812 aaKnown RBP26.72■■□□□ 1.87
CEACAM3-201ENST00000344550 TTC5Q8N0Z6 440 aa26.71■■□□□ 1.87
CEACAM3-201ENST00000344550 GPR162Q16538 588 aa26.7■■□□□ 1.86
CEACAM3-201ENST00000344550 SMIM5Q71RC9 77 aa26.7■■□□□ 1.86
CEACAM3-201ENST00000344550 PNNQ9H307 717 aaKnown RBP26.7■■□□□ 1.86
CEACAM3-201ENST00000344550 KCPQ6ZWJ8 1503 aa26.7■■□□□ 1.86
CEACAM3-201ENST00000344550 MYH14Q7Z406 1995 aaKnown RBP26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 TJP1Q07157 1748 aa26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 SLC39A6Q13433 755 aa26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 INTS5Q6P9B9 1019 aaKnown RBP26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 TEX13AQ9BXU3 409 aaPredicted RBP26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 CCDC87Q9NVE4 849 aa26.69■■□□□ 1.86
CEACAM3-201ENST00000344550 NEFMP07197 916 aa26.68■■□□□ 1.86
CEACAM3-201ENST00000344550 CYP19A1P11511 503 aaPredicted RBP26.68■■□□□ 1.86
CEACAM3-201ENST00000344550 ZNF790Q6PG37 636 aa26.68■■□□□ 1.86
CEACAM3-201ENST00000344550 DNAJC10Q8IXB1 793 aa26.68■■□□□ 1.86
CEACAM3-201ENST00000344550 NLGN2Q8NFZ4 835 aa26.68■■□□□ 1.86
CEACAM3-201ENST00000344550 GRIN3BO60391 1043 aa26.67■■□□□ 1.86
CEACAM3-201ENST00000344550 RTF1Q92541 710 aaKnown RBP26.67■■□□□ 1.86
CEACAM3-201ENST00000344550 STARD3NLO95772 234 aa26.66■■□□□ 1.86
CEACAM3-201ENST00000344550 MMP10P09238 476 aa26.66■■□□□ 1.86
CEACAM3-201ENST00000344550 GYS1P13807 737 aa26.66■■□□□ 1.86
CEACAM3-201ENST00000344550 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
CEACAM3-201ENST00000344550 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
CEACAM3-201ENST00000344550 USP42Q9H9J4 1324 aaKnown RBP26.64■■□□□ 1.85
CEACAM3-201ENST00000344550 DDX10Q13206 875 aaKnown RBP26.63■■□□□ 1.85
CEACAM3-201ENST00000344550 SIPA1L3O60292 1781 aaPredicted RBP26.63■■□□□ 1.85
CEACAM3-201ENST00000344550 SOS1Q07889 1333 aaPredicted RBP26.63■■□□□ 1.85
CEACAM3-201ENST00000344550 FMNL2Q96PY5 1086 aa26.62■■□□□ 1.85
CEACAM3-201ENST00000344550 UTRNP46939 3433 aa26.62■■□□□ 1.85
CEACAM3-201ENST00000344550 HEG1Q9ULI3 1381 aa26.61■■□□□ 1.85
CEACAM3-201ENST00000344550 ZNF496Q96IT1 587 aaPredicted RBP26.61■■□□□ 1.85
CEACAM3-201ENST00000344550 CHD4Q14839 1912 aa26.61■■□□□ 1.85
CEACAM3-201ENST00000344550 BTBD11A6QL63 1104 aa26.6■■□□□ 1.85
CEACAM3-201ENST00000344550 TGFB2P61812 414 aa26.6■■□□□ 1.85
CEACAM3-201ENST00000344550 PARP3Q9Y6F1 533 aa26.6■■□□□ 1.85
CEACAM3-201ENST00000344550 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
CEACAM3-201ENST00000344550 ZPR1O75312 459 aa26.59■■□□□ 1.85
CEACAM3-201ENST00000344550 PLEKHF1Q96S99 279 aa26.58■■□□□ 1.85
CEACAM3-201ENST00000344550 A0A087WZG4 1122 aa26.57■■□□□ 1.84
CEACAM3-201ENST00000344550 NARFQ9UHQ1 456 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms