RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
CDC42-202ENST00000344548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■□□□□ 8.4
CDC42-202ENST00000344548 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
CDC42-202ENST00000344548 AHDC1Q5TGY3 1603 aaPredicted RBP17.23■□□□□ 0.35
CDC42-202ENST00000344548 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
CDC42-202ENST00000344548 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
CDC42-202ENST00000344548 NFATC2IPQ8NCF5 419 aa17.23■□□□□ 0.35
CDC42-202ENST00000344548 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
CDC42-202ENST00000344548 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
CDC42-202ENST00000344548 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
CDC42-202ENST00000344548 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
CDC42-202ENST00000344548 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
CDC42-202ENST00000344548 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
CDC42-202ENST00000344548 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
CDC42-202ENST00000344548 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.35
CDC42-202ENST00000344548 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
CDC42-202ENST00000344548 ANXA1P04083 346 aa17.21■□□□□ 0.35
CDC42-202ENST00000344548 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
CDC42-202ENST00000344548 PTPRCP08575 1304 aa17.21■□□□□ 0.35
CDC42-202ENST00000344548 SCN11AQ9UI33 1791 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 EVA1CP58658 441 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 FLIIQ13045 1269 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 CARD10Q9BWT7 1032 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.34
CDC42-202ENST00000344548 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
CDC42-202ENST00000344548 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
CDC42-202ENST00000344548 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
CDC42-202ENST00000344548 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
CDC42-202ENST00000344548 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
CDC42-202ENST00000344548 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
CDC42-202ENST00000344548 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
CDC42-202ENST00000344548 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
CDC42-202ENST00000344548 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
CDC42-202ENST00000344548 PDE4AP27815 886 aa17.18■□□□□ 0.34
CDC42-202ENST00000344548 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
CDC42-202ENST00000344548 IL2RBP14784 551 aa17.17■□□□□ 0.34
CDC42-202ENST00000344548 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
CDC42-202ENST00000344548 MEIS3Q99687 375 aa17.17■□□□□ 0.34
CDC42-202ENST00000344548 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
CDC42-202ENST00000344548 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
CDC42-202ENST00000344548 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
CDC42-202ENST00000344548 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
CDC42-202ENST00000344548 ADAMTS2O95450 1211 aa17.16■□□□□ 0.34
CDC42-202ENST00000344548 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
CDC42-202ENST00000344548 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
CDC42-202ENST00000344548 PHLPP1O60346 1717 aa17.15■□□□□ 0.34
CDC42-202ENST00000344548 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
CDC42-202ENST00000344548 SHANK3Q9BYB0 1731 aa17.15■□□□□ 0.34
CDC42-202ENST00000344548 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
CDC42-202ENST00000344548 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
CDC42-202ENST00000344548 PARP4Q9UKK3 1724 aaKnown RBP17.14■□□□□ 0.33
CDC42-202ENST00000344548 HOXB7P09629 217 aa17.14■□□□□ 0.33
CDC42-202ENST00000344548 TOM1O60784 492 aa17.13■□□□□ 0.33
CDC42-202ENST00000344548 MRC1P22897 1456 aa17.13■□□□□ 0.33
CDC42-202ENST00000344548 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 NUTM2BA6NNL0 878 aaPredicted RBP17.12■□□□□ 0.33
CDC42-202ENST00000344548 NUTM2EB1AL46 878 aaPredicted RBP17.12■□□□□ 0.33
CDC42-202ENST00000344548 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
CDC42-202ENST00000344548 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
CDC42-202ENST00000344548 COL14A1Q05707 1796 aaKnown RBP17.11■□□□□ 0.33
CDC42-202ENST00000344548 C5P01031 1676 aa17.11■□□□□ 0.33
CDC42-202ENST00000344548 CABP4P57796 275 aa17.11■□□□□ 0.33
CDC42-202ENST00000344548 PDIA6Q15084 440 aa17.11■□□□□ 0.33
CDC42-202ENST00000344548 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
CDC42-202ENST00000344548 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
CDC42-202ENST00000344548 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
CDC42-202ENST00000344548 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
CDC42-202ENST00000344548 PI4KAP2A4QPH2 592 aa17.09■□□□□ 0.33
CDC42-202ENST00000344548 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
CDC42-202ENST00000344548 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
CDC42-202ENST00000344548 PI4KAP1Q8N8J0 262 aa17.09■□□□□ 0.33
CDC42-202ENST00000344548 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
CDC42-202ENST00000344548 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
CDC42-202ENST00000344548 ADCY9O60503 1353 aa17.08■□□□□ 0.33
CDC42-202ENST00000344548 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
CDC42-202ENST00000344548 DISP2A7MBM2 1401 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 GLI3P10071 1580 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 NUCB1Q02818 461 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
CDC42-202ENST00000344548 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
CDC42-202ENST00000344548 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
CDC42-202ENST00000344548 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
CDC42-202ENST00000344548 MYL6BP14649 208 aa17.05■□□□□ 0.32
CDC42-202ENST00000344548 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
CDC42-202ENST00000344548 BEND3Q5T5X7 828 aa17.05■□□□□ 0.32
CDC42-202ENST00000344548 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
CDC42-202ENST00000344548 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
CDC42-202ENST00000344548 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
CDC42-202ENST00000344548 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
CDC42-202ENST00000344548 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
CDC42-202ENST00000344548 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDC42-202ENST00000344548 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
CDC42-202ENST00000344548 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms