RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 PTPRUQ92729 1446 aa29.46■■■□□ 2.31
NELFB-201ENST00000343053 CCT4P50991 539 aaKnown RBP29.46■■■□□ 2.31
NELFB-201ENST00000343053 FLIIQ13045 1269 aa29.45■■■□□ 2.31
NELFB-201ENST00000343053 LMBRD1Q9NUN5 540 aa29.45■■■□□ 2.3
NELFB-201ENST00000343053 ZDHHC9Q9Y397 364 aa29.45■■■□□ 2.3
NELFB-201ENST00000343053 NALCNQ8IZF0 1738 aa29.44■■■□□ 2.3
NELFB-201ENST00000343053 CYP2E1P05181 493 aaPredicted RBP29.44■■■□□ 2.3
NELFB-201ENST00000343053 ARHGEF10O15013 1369 aa29.44■■■□□ 2.3
NELFB-201ENST00000343053 USP31Q70CQ4 1352 aa29.44■■■□□ 2.3
NELFB-201ENST00000343053 PALD1Q9ULE6 856 aa29.44■■■□□ 2.3
NELFB-201ENST00000343053 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
NELFB-201ENST00000343053 RGPD8O14715 1765 aaPredicted RBP29.43■■■□□ 2.3
NELFB-201ENST00000343053 FLT4P35916 1363 aa29.43■■■□□ 2.3
NELFB-201ENST00000343053 FMN2Q9NZ56 1722 aa29.43■■■□□ 2.3
NELFB-201ENST00000343053 CLEC17AQ6ZS10 378 aa29.43■■■□□ 2.3
NELFB-201ENST00000343053 FOXD4L6Q3SYB3 417 aaPredicted RBP29.42■■■□□ 2.3
NELFB-201ENST00000343053 FOXD4L3Q6VB84 417 aaPredicted RBP29.42■■■□□ 2.3
NELFB-201ENST00000343053 USHBP1Q8N6Y0 703 aa29.42■■■□□ 2.3
NELFB-201ENST00000343053 LRRFIP2Q9Y608 721 aaKnown RBP29.42■■■□□ 2.3
NELFB-201ENST00000343053 IL1RAPL2Q9NP60 686 aa29.41■■■□□ 2.3
NELFB-201ENST00000343053 ANO2Q9NQ90 1003 aa29.41■■■□□ 2.3
NELFB-201ENST00000343053 NLRP6P59044 892 aa29.41■■■□□ 2.3
NELFB-201ENST00000343053 ZSCAN23Q3MJ62 389 aa29.41■■■□□ 2.3
NELFB-201ENST00000343053 LRRCC1Q9C099 1032 aa29.41■■■□□ 2.3
NELFB-201ENST00000343053 MX1P20591 662 aa29.4■■■□□ 2.3
NELFB-201ENST00000343053 UNC5CLQ8IV45 518 aa29.4■■■□□ 2.3
NELFB-201ENST00000343053 SBNO1A3KN83 1393 aa29.4■■■□□ 2.3
NELFB-201ENST00000343053 MAP4K4O95819 1239 aaPredicted RBP29.39■■■□□ 2.3
NELFB-201ENST00000343053 C14orf37Q86TY3 774 aa29.38■■■□□ 2.29
NELFB-201ENST00000343053 GPT2Q8TD30 523 aa29.38■■■□□ 2.29
NELFB-201ENST00000343053 NSFL1CQ9UNZ2 370 aaKnown RBP29.38■■■□□ 2.29
NELFB-201ENST00000343053 TMX3Q96JJ7 454 aa29.38■■■□□ 2.29
NELFB-201ENST00000343053 ESYT1Q9BSJ8 1104 aa29.38■■■□□ 2.29
NELFB-201ENST00000343053 UPF3BQ9BZI7 483 aaKnown RBP29.37■■■□□ 2.29
NELFB-201ENST00000343053 IGSF1Q8N6C5 1336 aa29.37■■■□□ 2.29
NELFB-201ENST00000343053 SSH2Q76I76 1423 aa29.37■■■□□ 2.29
NELFB-201ENST00000343053 PLEKHG5O94827 1062 aa29.37■■■□□ 2.29
NELFB-201ENST00000343053 OSBPL3Q9H4L5 887 aa29.36■■■□□ 2.29
NELFB-201ENST00000343053 IL25Q9H293 177 aa29.35■■■□□ 2.29
NELFB-201ENST00000343053 CCDC30Q5VVM6 783 aa29.35■■■□□ 2.29
NELFB-201ENST00000343053 NUTM1Q86Y26 1132 aa29.35■■■□□ 2.29
NELFB-201ENST00000343053 PHAXQ9H814 394 aaKnown RBP29.35■■■□□ 2.29
NELFB-201ENST00000343053 CWC22Q9HCG8 908 aaKnown RBP29.35■■■□□ 2.29
NELFB-201ENST00000343053 KDRP35968 1356 aa29.34■■■□□ 2.29
NELFB-201ENST00000343053 GNAT3A8MTJ3 354 aa29.34■■■□□ 2.29
NELFB-201ENST00000343053 PLEKHG1Q9ULL1 1385 aa29.34■■■□□ 2.29
NELFB-201ENST00000343053 PRIM1P49642 420 aaKnown RBP29.34■■■□□ 2.29
NELFB-201ENST00000343053 IL17REQ8NFR9 667 aa29.34■■■□□ 2.29
NELFB-201ENST00000343053 RBSNQ9H1K0 784 aa29.34■■■□□ 2.29
NELFB-201ENST00000343053 SALL3Q9BXA9 1300 aa29.33■■■□□ 2.29
NELFB-201ENST00000343053 CCDC173Q0VFZ6 552 aa29.33■■■□□ 2.29
NELFB-201ENST00000343053 ANP32BQ92688 251 aaKnown RBP29.33■■■□□ 2.29
NELFB-201ENST00000343053 ZBTB7CA1YPR0 619 aa29.32■■■□□ 2.28
NELFB-201ENST00000343053 TPRNQ4KMQ1 711 aa29.32■■■□□ 2.28
NELFB-201ENST00000343053 TTC21AQ8NDW8 1320 aa29.32■■■□□ 2.28
NELFB-201ENST00000343053 EIF2S2P20042 333 aaKnown RBP29.31■■■□□ 2.28
NELFB-201ENST00000343053 CHMLP26374 656 aa29.31■■■□□ 2.28
NELFB-201ENST00000343053 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
NELFB-201ENST00000343053 GNAI3P08754 354 aa29.31■■■□□ 2.28
NELFB-201ENST00000343053 ATP8B2P98198 1209 aa29.3■■■□□ 2.28
NELFB-201ENST00000343053 EID1Q9Y6B2 187 aa29.3■■■□□ 2.28
NELFB-201ENST00000343053 FAM208AQ9UK61 1670 aaKnown RBP29.3■■■□□ 2.28
NELFB-201ENST00000343053 PIK3C2AO00443 1686 aa29.3■■■□□ 2.28
NELFB-201ENST00000343053 HOXC9P31274 260 aa29.29■■■□□ 2.28
NELFB-201ENST00000343053 TMEM63CQ9P1W3 806 aa29.29■■■□□ 2.28
NELFB-201ENST00000343053 IBTKQ9P2D0 1353 aaPredicted RBP29.29■■■□□ 2.28
NELFB-201ENST00000343053 SYCE3A1L190 88 aa29.29■■■□□ 2.28
NELFB-201ENST00000343053 ZNF445P59923 1031 aa29.29■■■□□ 2.28
NELFB-201ENST00000343053 USP44Q9H0E7 712 aa29.29■■■□□ 2.28
NELFB-201ENST00000343053 UBTFL1P0CB47 393 aaPredicted RBP29.28■■■□□ 2.28
NELFB-201ENST00000343053 HDGFL1Q5TGJ6 251 aa29.28■■■□□ 2.28
NELFB-201ENST00000343053 RBM33Q96EV2 1170 aaKnown RBP29.28■■■□□ 2.28
NELFB-201ENST00000343053 ANXA1P04083 346 aa29.27■■■□□ 2.28
NELFB-201ENST00000343053 GDPD2Q9HCC8 539 aa29.27■■■□□ 2.28
NELFB-201ENST00000343053 XRN1Q8IZH2 1706 aaKnown RBP29.27■■■□□ 2.28
NELFB-201ENST00000343053 DTNBO60941 627 aa29.27■■■□□ 2.28
NELFB-201ENST00000343053 LARP6Q9BRS8 491 aaKnown RBP29.27■■■□□ 2.28
NELFB-201ENST00000343053 ABTB2Q8N961 1025 aa29.26■■■□□ 2.27
NELFB-201ENST00000343053 PPP1R9BQ96SB3 815 aa29.26■■■□□ 2.27
NELFB-201ENST00000343053 DIP2AQ14689 1571 aa29.26■■■□□ 2.27
NELFB-201ENST00000343053 MCCP23508 829 aa29.25■■■□□ 2.27
NELFB-201ENST00000343053 RNF214Q8ND24 703 aa29.25■■■□□ 2.27
NELFB-201ENST00000343053 TUBGCP6Q96RT7 1819 aa29.24■■■□□ 2.27
NELFB-201ENST00000343053 SURF6O75683 361 aaKnown RBP29.24■■■□□ 2.27
NELFB-201ENST00000343053 MAP3K5Q99683 1374 aa29.24■■■□□ 2.27
NELFB-201ENST00000343053 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
NELFB-201ENST00000343053 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
NELFB-201ENST00000343053 TAF7Q15545 349 aaPredicted RBP29.22■■■□□ 2.27
NELFB-201ENST00000343053 NBPF7P0C2Y1 421 aaPredicted RBP29.2■■■□□ 2.26
NELFB-201ENST00000343053 ZSCAN30Q86W11 494 aa29.19■■■□□ 2.26
NELFB-201ENST00000343053 KCNQ3O43525 872 aa29.19■■■□□ 2.26
NELFB-201ENST00000343053 KCNA6P17658 529 aa29.19■■■□□ 2.26
NELFB-201ENST00000343053 SOS1Q07889 1333 aaPredicted RBP29.19■■■□□ 2.26
NELFB-201ENST00000343053 SRGAP3O43295 1099 aa29.18■■■□□ 2.26
NELFB-201ENST00000343053 LRRC37A3O60309 1634 aa29.18■■■□□ 2.26
NELFB-201ENST00000343053 MSNP26038 577 aaKnown RBP29.18■■■□□ 2.26
NELFB-201ENST00000343053 LGR6Q9HBX8 967 aa29.18■■■□□ 2.26
NELFB-201ENST00000343053 BRD1O95696 1058 aa29.17■■■□□ 2.26
NELFB-201ENST00000343053 CHPF2Q9P2E5 772 aa29.17■■■□□ 2.26
NELFB-201ENST00000343053 NWD1Q149M9 1564 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms