RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 PIK3R5Q8WYR1 880 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 SLKQ9H2G2 1235 aaPredicted RBP20.65■□□□□ 0.9
CDK11B-201ENST00000340677 CPSF1Q10570 1443 aaKnown RBP20.65■□□□□ 0.9
CDK11B-201ENST00000340677 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 MCM4P33991 863 aa20.64■□□□□ 0.9
CDK11B-201ENST00000340677 BIRC2Q13490 618 aa20.64■□□□□ 0.9
CDK11B-201ENST00000340677 SUFUQ9UMX1 484 aa20.64■□□□□ 0.9
CDK11B-201ENST00000340677 TOMM22Q9NS69 142 aa20.63■□□□□ 0.89
CDK11B-201ENST00000340677 NOL7Q9UMY1 257 aaKnown RBP20.63■□□□□ 0.89
CDK11B-201ENST00000340677 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.89
CDK11B-201ENST00000340677 ANKRD23Q86SG2 305 aa20.62■□□□□ 0.89
CDK11B-201ENST00000340677 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.62■□□□□ 0.89
CDK11B-201ENST00000340677 FOXD4L6Q3SYB3 417 aaPredicted RBP20.62■□□□□ 0.89
CDK11B-201ENST00000340677 FOXD4L3Q6VB84 417 aaPredicted RBP20.62■□□□□ 0.89
CDK11B-201ENST00000340677 GAS2L3Q86XJ1 694 aa20.62■□□□□ 0.89
CDK11B-201ENST00000340677 PDCL2Q8N4E4 241 aa20.62■□□□□ 0.89
CDK11B-201ENST00000340677 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
CDK11B-201ENST00000340677 NOL10Q9BSC4 688 aaKnown RBP20.62■□□□□ 0.89
CDK11B-201ENST00000340677 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
CDK11B-201ENST00000340677 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
CDK11B-201ENST00000340677 TNPO1Q92973 898 aaKnown RBP20.61■□□□□ 0.89
CDK11B-201ENST00000340677 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
CDK11B-201ENST00000340677 MED4Q9NPJ6 270 aa20.61■□□□□ 0.89
CDK11B-201ENST00000340677 CCDC61Q9Y6R9 512 aa20.61■□□□□ 0.89
CDK11B-201ENST00000340677 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
CDK11B-201ENST00000340677 FAM212AQ96EL1 285 aa20.6■□□□□ 0.89
CDK11B-201ENST00000340677 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
CDK11B-201ENST00000340677 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
CDK11B-201ENST00000340677 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
CDK11B-201ENST00000340677 POLR3AO14802 1390 aaPredicted RBP20.6■□□□□ 0.89
CDK11B-201ENST00000340677 LRCH2Q5VUJ6 765 aa20.6■□□□□ 0.89
CDK11B-201ENST00000340677 POLD1P28340 1107 aa20.59■□□□□ 0.89
CDK11B-201ENST00000340677 HS1BP3Q53T59 392 aa20.59■□□□□ 0.89
CDK11B-201ENST00000340677 HSP90AB4PQ58FF6 505 aa20.59■□□□□ 0.89
CDK11B-201ENST00000340677 NUDT16Q96DE0 195 aaKnown RBP20.59■□□□□ 0.89
CDK11B-201ENST00000340677 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
CDK11B-201ENST00000340677 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
CDK11B-201ENST00000340677 FAM177A1Q8N128 213 aaPredicted RBP20.59■□□□□ 0.89
CDK11B-201ENST00000340677 SKAP1Q86WV1 359 aa20.58■□□□□ 0.89
CDK11B-201ENST00000340677 FEZ1Q99689 392 aa20.58■□□□□ 0.89
CDK11B-201ENST00000340677 MORC1Q86VD1 984 aa20.58■□□□□ 0.88
CDK11B-201ENST00000340677 OGFRQ9NZT2 677 aa20.58■□□□□ 0.88
CDK11B-201ENST00000340677 RPS6KL1Q9Y6S9 549 aa20.58■□□□□ 0.88
CDK11B-201ENST00000340677 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
CDK11B-201ENST00000340677 GTF2F1P35269 517 aaKnown RBP eCLIP20.57■□□□□ 0.88
CDK11B-201ENST00000340677 CXorf56Q9H5V9 222 aa20.57■□□□□ 0.88
CDK11B-201ENST00000340677 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
CDK11B-201ENST00000340677 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
CDK11B-201ENST00000340677 TERF2Q15554 542 aa20.56■□□□□ 0.88
CDK11B-201ENST00000340677 ERICH4A6NGS2 130 aa20.56■□□□□ 0.88
CDK11B-201ENST00000340677 PPP1R12AO14974 1030 aaPredicted RBP20.56■□□□□ 0.88
CDK11B-201ENST00000340677 KLHL33A6NCF5 533 aa20.55■□□□□ 0.88
CDK11B-201ENST00000340677 RASSF4Q9H2L5 321 aa20.55■□□□□ 0.88
CDK11B-201ENST00000340677 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
CDK11B-201ENST00000340677 CCT2P78371 535 aaKnown RBP20.55■□□□□ 0.88
CDK11B-201ENST00000340677 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
CDK11B-201ENST00000340677 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
CDK11B-201ENST00000340677 SHPRHQ149N8 1683 aa20.54■□□□□ 0.88
CDK11B-201ENST00000340677 KCNA6P17658 529 aa20.54■□□□□ 0.88
CDK11B-201ENST00000340677 C1QTNF12Q5T7M4 302 aa20.53■□□□□ 0.88
CDK11B-201ENST00000340677 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
CDK11B-201ENST00000340677 RBM5P52756 815 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDK11B-201ENST00000340677 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
CDK11B-201ENST00000340677 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
CDK11B-201ENST00000340677 RGPD8O14715 1765 aaPredicted RBP20.52■□□□□ 0.88
CDK11B-201ENST00000340677 GYS2P54840 703 aa20.52■□□□□ 0.88
CDK11B-201ENST00000340677 FYB1O15117 783 aa20.52■□□□□ 0.87
CDK11B-201ENST00000340677 HSPA2P54652 639 aa20.52■□□□□ 0.87
CDK11B-201ENST00000340677 C8orf34Q49A92 452 aa20.51■□□□□ 0.87
CDK11B-201ENST00000340677 ADGRL3Q9HAR2 1447 aa20.5■□□□□ 0.87
CDK11B-201ENST00000340677 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
CDK11B-201ENST00000340677 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
CDK11B-201ENST00000340677 C11orf91Q3C1V1 193 aa20.49■□□□□ 0.87
CDK11B-201ENST00000340677 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
CDK11B-201ENST00000340677 BCL2L12Q9HB09 334 aa20.49■□□□□ 0.87
CDK11B-201ENST00000340677 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
CDK11B-201ENST00000340677 NASPP49321 788 aaPredicted RBP20.49■□□□□ 0.87
CDK11B-201ENST00000340677 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
CDK11B-201ENST00000340677 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDK11B-201ENST00000340677 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
CDK11B-201ENST00000340677 NCKAP5LQ9HCH0 1330 aa20.48■□□□□ 0.87
CDK11B-201ENST00000340677 RRP1P56182 461 aaKnown RBP20.47■□□□□ 0.87
CDK11B-201ENST00000340677 PPP2R5AQ15172 486 aa20.47■□□□□ 0.87
CDK11B-201ENST00000340677 NBPF3Q9H094 633 aa20.47■□□□□ 0.87
CDK11B-201ENST00000340677 USP54Q70EL1 1684 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 HMGN5P82970 282 aaKnown RBP20.46■□□□□ 0.87
CDK11B-201ENST00000340677 FAM210AQ96ND0 272 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 TSPAN18Q96SJ8 248 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 USP6P35125 1406 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 RAD50Q92878 1312 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 HNRNPH2P55795 449 aaKnown RBP20.46■□□□□ 0.87
CDK11B-201ENST00000340677 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 DRC1Q96MC2 740 aa20.46■□□□□ 0.87
CDK11B-201ENST00000340677 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
CDK11B-201ENST00000340677 SSH2Q76I76 1423 aa20.45■□□□□ 0.86
CDK11B-201ENST00000340677 COQ9O75208 318 aa20.45■□□□□ 0.86
CDK11B-201ENST00000340677 MAP2P11137 1827 aaKnown RBP20.45■□□□□ 0.86
CDK11B-201ENST00000340677 MCM5P33992 734 aa20.45■□□□□ 0.86
CDK11B-201ENST00000340677 TSGA10IPQ3SY00 556 aa20.45■□□□□ 0.86
CDK11B-201ENST00000340677 IQSEC2Q5JU85 1478 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms