RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 DLG5Q8TDM6 1919 aa16.95■□□□□ 0.3
PHF20-201ENST00000339089 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
PHF20-201ENST00000339089 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
PHF20-201ENST00000339089 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
PHF20-201ENST00000339089 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
PHF20-201ENST00000339089 MCM10Q7L590 875 aa16.93■□□□□ 0.3
PHF20-201ENST00000339089 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
PHF20-201ENST00000339089 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
PHF20-201ENST00000339089 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
PHF20-201ENST00000339089 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
PHF20-201ENST00000339089 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
PHF20-201ENST00000339089 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
PHF20-201ENST00000339089 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
PHF20-201ENST00000339089 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
PHF20-201ENST00000339089 LOC102724428A0A0B4J2F2 783 aa16.91■□□□□ 0.3
PHF20-201ENST00000339089 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
PHF20-201ENST00000339089 SIK1P57059 783 aa16.91■□□□□ 0.3
PHF20-201ENST00000339089 ITPK1Q13572 414 aa16.91■□□□□ 0.3
PHF20-201ENST00000339089 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
PHF20-201ENST00000339089 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
PHF20-201ENST00000339089 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
PHF20-201ENST00000339089 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
PHF20-201ENST00000339089 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
PHF20-201ENST00000339089 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
PHF20-201ENST00000339089 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
PHF20-201ENST00000339089 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.3
PHF20-201ENST00000339089 SLC15A2Q16348 729 aa16.89■□□□□ 0.29
PHF20-201ENST00000339089 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
PHF20-201ENST00000339089 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
PHF20-201ENST00000339089 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 KCNQ3O43525 872 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 RIPK4P57078 832 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 C5P01031 1676 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 NEFMP07197 916 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 TEFQ10587 303 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
PHF20-201ENST00000339089 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
PHF20-201ENST00000339089 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
PHF20-201ENST00000339089 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
PHF20-201ENST00000339089 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
PHF20-201ENST00000339089 AMIGO3Q86WK7 504 aa16.87■□□□□ 0.29
PHF20-201ENST00000339089 APAF1O14727 1248 aa16.86■□□□□ 0.29
PHF20-201ENST00000339089 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
PHF20-201ENST00000339089 CICQ96RK0 1608 aaPredicted RBP16.86■□□□□ 0.29
PHF20-201ENST00000339089 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
PHF20-201ENST00000339089 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 TJP1Q07157 1748 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 STK32BQ9NY57 414 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
PHF20-201ENST00000339089 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
PHF20-201ENST00000339089 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
PHF20-201ENST00000339089 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
PHF20-201ENST00000339089 MIER1Q8N108 512 aa16.84■□□□□ 0.29
PHF20-201ENST00000339089 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
PHF20-201ENST00000339089 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
PHF20-201ENST00000339089 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
PHF20-201ENST00000339089 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
PHF20-201ENST00000339089 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
PHF20-201ENST00000339089 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
PHF20-201ENST00000339089 QSER1Q2KHR3 1735 aa16.82■□□□□ 0.28
PHF20-201ENST00000339089 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
PHF20-201ENST00000339089 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
PHF20-201ENST00000339089 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
PHF20-201ENST00000339089 KDM3BQ7LBC6 1761 aa16.81■□□□□ 0.28
PHF20-201ENST00000339089 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
PHF20-201ENST00000339089 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
PHF20-201ENST00000339089 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
PHF20-201ENST00000339089 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
PHF20-201ENST00000339089 CNTNAP4Q9C0A0 1308 aa16.79■□□□□ 0.28
PHF20-201ENST00000339089 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
PHF20-201ENST00000339089 CYP19A1P11511 503 aaPredicted RBP16.78■□□□□ 0.28
PHF20-201ENST00000339089 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
PHF20-201ENST00000339089 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
PHF20-201ENST00000339089 INTS5Q6P9B9 1019 aaKnown RBP16.78■□□□□ 0.28
PHF20-201ENST00000339089 COL23A1Q86Y22 540 aaPredicted RBP16.78■□□□□ 0.28
PHF20-201ENST00000339089 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
PHF20-201ENST00000339089 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
PHF20-201ENST00000339089 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
PHF20-201ENST00000339089 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
PHF20-201ENST00000339089 CHL1O00533 1208 aa16.77■□□□□ 0.27
PHF20-201ENST00000339089 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
PHF20-201ENST00000339089 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
PHF20-201ENST00000339089 AK7Q96M32 723 aa16.76■□□□□ 0.27
PHF20-201ENST00000339089 GNPATO15228 680 aa16.75■□□□□ 0.27
PHF20-201ENST00000339089 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
PHF20-201ENST00000339089 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
PHF20-201ENST00000339089 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
PHF20-201ENST00000339089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
PHF20-201ENST00000339089 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
PHF20-201ENST00000339089 BABAM1Q9NWV8 329 aa16.75■□□□□ 0.27
PHF20-201ENST00000339089 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
PHF20-201ENST00000339089 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
PHF20-201ENST00000339089 SSFA2P28290 1259 aa16.73■□□□□ 0.27
PHF20-201ENST00000339089 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
PHF20-201ENST00000339089 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
PHF20-201ENST00000339089 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
PHF20-201ENST00000339089 TSPYL4Q9UJ04 414 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms