RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 CCDC87Q9NVE4 849 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 C4AP0C0L4 1744 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 EVC2Q86UK5 1308 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 RGPD2P0DJD1 1756 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 SBNO2Q9Y2G9 1366 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 VEGFBP49765 207 aa22.46■■□□□ 1.19
TSPO-202ENST00000337554 RASSF7Q02833 373 aa22.45■■□□□ 1.18
TSPO-202ENST00000337554 ITPK1Q13572 414 aa22.45■■□□□ 1.18
TSPO-202ENST00000337554 NLGN1Q8N2Q7 840 aa22.45■■□□□ 1.18
TSPO-202ENST00000337554 SMARCC1Q92922 1105 aaPredicted RBP22.45■■□□□ 1.18
TSPO-202ENST00000337554 LOC102724428A0A0B4J2F2 783 aa22.43■■□□□ 1.18
TSPO-202ENST00000337554 SIK1P57059 783 aa22.43■■□□□ 1.18
TSPO-202ENST00000337554 TMF1P82094 1093 aa22.43■■□□□ 1.18
TSPO-202ENST00000337554 VIRMAQ69YN4 1812 aaKnown RBP22.43■■□□□ 1.18
TSPO-202ENST00000337554 PIGBQ92521 554 aa22.42■■□□□ 1.18
TSPO-202ENST00000337554 CD163L1Q9NR16 1453 aa22.41■■□□□ 1.18
TSPO-202ENST00000337554 ITGB4P16144 1822 aa22.41■■□□□ 1.18
TSPO-202ENST00000337554 POTEIP0CG38 1075 aa22.39■■□□□ 1.17
TSPO-202ENST00000337554 POTEJP0CG39 1038 aa22.39■■□□□ 1.17
TSPO-202ENST00000337554 GYS1P13807 737 aa22.39■■□□□ 1.17
TSPO-202ENST00000337554 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
TSPO-202ENST00000337554 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
TSPO-202ENST00000337554 CGNL1Q0VF96 1302 aa22.38■■□□□ 1.17
TSPO-202ENST00000337554 CYP27B1O15528 508 aa22.38■■□□□ 1.17
TSPO-202ENST00000337554 CHRNA5P30532 468 aa22.38■■□□□ 1.17
TSPO-202ENST00000337554 HOXC9P31274 260 aa22.38■■□□□ 1.17
TSPO-202ENST00000337554 CHADLQ6NUI6 762 aa22.38■■□□□ 1.17
TSPO-202ENST00000337554 PASKQ96RG2 1323 aa22.37■■□□□ 1.17
TSPO-202ENST00000337554 LMNB1P20700 586 aa22.37■■□□□ 1.17
TSPO-202ENST00000337554 PARP3Q9Y6F1 533 aa22.37■■□□□ 1.17
TSPO-202ENST00000337554 USHBP1Q8N6Y0 703 aa22.36■■□□□ 1.17
TSPO-202ENST00000337554 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
TSPO-202ENST00000337554 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
TSPO-202ENST00000337554 TRAPPC3LQ5T215 181 aa22.35■■□□□ 1.17
TSPO-202ENST00000337554 ARHGEF1Q92888 912 aaKnown RBP22.35■■□□□ 1.17
TSPO-202ENST00000337554 TIAM2Q8IVF5 1701 aa22.34■■□□□ 1.17
TSPO-202ENST00000337554 MAP3K19Q56UN5 1328 aa22.34■■□□□ 1.17
TSPO-202ENST00000337554 PDE4DIPQ5VU43 2346 aa22.34■■□□□ 1.17
TSPO-202ENST00000337554 FBLN1P23142 703 aa22.33■■□□□ 1.17
TSPO-202ENST00000337554 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
TSPO-202ENST00000337554 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
TSPO-202ENST00000337554 RTCBQ9Y3I0 505 aaKnown RBP22.31■■□□□ 1.16
TSPO-202ENST00000337554 DDR1Q08345 913 aa22.3■■□□□ 1.16
TSPO-202ENST00000337554 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
TSPO-202ENST00000337554 TATP17735 454 aaPredicted RBP22.28■■□□□ 1.16
TSPO-202ENST00000337554 TMEM88BA6NKF7 163 aa22.27■■□□□ 1.16
TSPO-202ENST00000337554 NFKBIEO00221 500 aa22.27■■□□□ 1.16
TSPO-202ENST00000337554 SLC4A9Q96Q91 983 aa22.27■■□□□ 1.16
TSPO-202ENST00000337554 EDC4Q6P2E9 1401 aaKnown RBP22.26■■□□□ 1.15
TSPO-202ENST00000337554 ITGBL1O95965 494 aaPredicted RBP22.26■■□□□ 1.15
TSPO-202ENST00000337554 ADRA2BP18089 450 aa22.26■■□□□ 1.15
TSPO-202ENST00000337554 NKX1-1Q15270 411 aaPredicted RBP22.26■■□□□ 1.15
TSPO-202ENST00000337554 CCDC88AQ3V6T2 1871 aa22.26■■□□□ 1.15
TSPO-202ENST00000337554 RASSF10A6NK89 507 aa22.25■■□□□ 1.15
TSPO-202ENST00000337554 AMPHP49418 695 aa22.25■■□□□ 1.15
TSPO-202ENST00000337554 KDRP35968 1356 aa22.25■■□□□ 1.15
TSPO-202ENST00000337554 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
TSPO-202ENST00000337554 MAP2K1Q02750 393 aaPredicted RBP22.24■■□□□ 1.15
TSPO-202ENST00000337554 DPY19L2Q6NUT2 758 aa22.24■■□□□ 1.15
TSPO-202ENST00000337554 RFC4P35249 363 aa22.23■■□□□ 1.15
TSPO-202ENST00000337554 FKBP8Q14318 412 aa22.23■■□□□ 1.15
TSPO-202ENST00000337554 CFAP44Q96MT7 982 aa22.23■■□□□ 1.15
TSPO-202ENST00000337554 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
TSPO-202ENST00000337554 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
TSPO-202ENST00000337554 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
TSPO-202ENST00000337554 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
TSPO-202ENST00000337554 MCOLN1Q9GZU1 580 aa22.21■■□□□ 1.15
TSPO-202ENST00000337554 DEFB115Q30KQ5 88 aa22.2■■□□□ 1.14
TSPO-202ENST00000337554 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
TSPO-202ENST00000337554 SRP68Q9UHB9 627 aaKnown RBP22.2■■□□□ 1.14
TSPO-202ENST00000337554 POLRMTO00411 1230 aaKnown RBP22.19■■□□□ 1.14
TSPO-202ENST00000337554 THSD7BQ9C0I4 1608 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 RTL1A6NKG5 1358 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 CNTNAP4Q9C0A0 1308 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 LDHDQ86WU2 507 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 TMOD3Q9NYL9 352 aa22.18■■□□□ 1.14
TSPO-202ENST00000337554 DDNO94850 711 aaPredicted RBP22.17■■□□□ 1.14
TSPO-202ENST00000337554 HDGFL2Q7Z4V5 671 aaPredicted RBP22.17■■□□□ 1.14
TSPO-202ENST00000337554 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
TSPO-202ENST00000337554 TM4SF1P30408 202 aa22.16■■□□□ 1.14
TSPO-202ENST00000337554 PRPF38BQ5VTL8 546 aaKnown RBP22.16■■□□□ 1.14
TSPO-202ENST00000337554 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
TSPO-202ENST00000337554 ZNF831Q5JPB2 1677 aa22.15■■□□□ 1.14
TSPO-202ENST00000337554 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.14
TSPO-202ENST00000337554 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
TSPO-202ENST00000337554 ERFEQ4G0M1 354 aa22.14■■□□□ 1.13
TSPO-202ENST00000337554 TSKSQ9UJT2 592 aa22.14■■□□□ 1.13
TSPO-202ENST00000337554 DLEC1Q9Y238 1755 aa22.13■■□□□ 1.13
TSPO-202ENST00000337554 TMC1Q8TDI8 760 aa22.13■■□□□ 1.13
TSPO-202ENST00000337554 DICER1Q9UPY3 1922 aaKnown RBP22.12■■□□□ 1.13
TSPO-202ENST00000337554 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
TSPO-202ENST00000337554 TAF1DQ9H5J8 278 aaPredicted RBP22.12■■□□□ 1.13
TSPO-202ENST00000337554 SMG6Q86US8 1419 aaKnown RBP22.12■■□□□ 1.13
TSPO-202ENST00000337554 LTBP1Q14766 1721 aa22.11■■□□□ 1.13
TSPO-202ENST00000337554 COG3Q96JB2 828 aa22.11■■□□□ 1.13
TSPO-202ENST00000337554 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
TSPO-202ENST00000337554 HSP90AB2PQ58FF8 381 aa22.1■■□□□ 1.13
TSPO-202ENST00000337554 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.13
TSPO-202ENST00000337554 L3MBTL3Q96JM7 780 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms