RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 AEBP2Q6ZN18 517 aaPredicted RBP33.13■■■□□ 2.89
ATF4-201ENST00000337304 CENPQQ7L2Z9 268 aaPredicted RBP33.13■■■□□ 2.89
ATF4-201ENST00000337304 UBAP1LF5GYI3 381 aa33.12■■■□□ 2.89
ATF4-201ENST00000337304 EIF4A1P60842 406 aaKnown RBP33.12■■■□□ 2.89
ATF4-201ENST00000337304 ABCC4O15439 1325 aa33.12■■■□□ 2.89
ATF4-201ENST00000337304 API5Q9BZZ5 524 aaKnown RBP33.12■■■□□ 2.89
ATF4-201ENST00000337304 KCNQ3O43525 872 aa33.11■■■□□ 2.89
ATF4-201ENST00000337304 SLC4A2P04920 1241 aa33.1■■■□□ 2.89
ATF4-201ENST00000337304 CACNA1FO60840 1977 aa33.1■■■□□ 2.89
ATF4-201ENST00000337304 IL2RBP14784 551 aa33.09■■■□□ 2.89
ATF4-201ENST00000337304 PCDHB15Q9Y5E8 787 aa33.08■■■□□ 2.89
ATF4-201ENST00000337304 RGS12O14924 1447 aa33.07■■■□□ 2.89
ATF4-201ENST00000337304 CCDC30Q5VVM6 783 aa33.07■■■□□ 2.89
ATF4-201ENST00000337304 SHANK3Q9BYB0 1731 aa33.07■■■□□ 2.88
ATF4-201ENST00000337304 PTPRCP08575 1304 aa33.07■■■□□ 2.88
ATF4-201ENST00000337304 ZCRB1Q8TBF4 217 aaKnown RBP33.07■■■□□ 2.88
ATF4-201ENST00000337304 DCAF5Q96JK2 942 aa33.07■■■□□ 2.88
ATF4-201ENST00000337304 IGHDP01880 384 aa33.06■■■□□ 2.88
ATF4-201ENST00000337304 SLC52A2Q9HAB3 445 aa33.06■■■□□ 2.88
ATF4-201ENST00000337304 TSHZ2Q9NRE2 1034 aa33.06■■■□□ 2.88
ATF4-201ENST00000337304 HSP90AB1P08238 724 aaKnown RBP33.06■■■□□ 2.88
ATF4-201ENST00000337304 STK31Q9BXU1 1019 aa33.06■■■□□ 2.88
ATF4-201ENST00000337304 MRC1P22897 1456 aa33.05■■■□□ 2.88
ATF4-201ENST00000337304 PLCH1Q4KWH8 1693 aa33.05■■■□□ 2.88
ATF4-201ENST00000337304 PCDH11XQ9BZA7 1347 aa33.04■■■□□ 2.88
ATF4-201ENST00000337304 PCDH11YQ9BZA8 1340 aa33.04■■■□□ 2.88
ATF4-201ENST00000337304 HOXB7P09629 217 aa33.04■■■□□ 2.88
ATF4-201ENST00000337304 ZBTB40Q9NUA8 1239 aa33.03■■■□□ 2.88
ATF4-201ENST00000337304 G2E3Q7L622 706 aa33.02■■■□□ 2.88
ATF4-201ENST00000337304 NECTIN2Q92692 538 aa33.02■■■□□ 2.88
ATF4-201ENST00000337304 HDGFL1Q5TGJ6 251 aa33.01■■■□□ 2.88
ATF4-201ENST00000337304 USP35Q9P2H5 1018 aa33.01■■■□□ 2.88
ATF4-201ENST00000337304 HEG1Q9ULI3 1381 aa33.01■■■□□ 2.87
ATF4-201ENST00000337304 NFATC2IPQ8NCF5 419 aa33.01■■■□□ 2.87
ATF4-201ENST00000337304 ADAMTS2O95450 1211 aa33■■■□□ 2.87
ATF4-201ENST00000337304 ZBTB7BO15156 539 aaPredicted RBP32.99■■■□□ 2.87
ATF4-201ENST00000337304 NRAPQ86VF7 1730 aa32.98■■■□□ 2.87
ATF4-201ENST00000337304 INTS3Q68E01 1043 aaKnown RBP32.97■■■□□ 2.87
ATF4-201ENST00000337304 ZNF790Q6PG37 636 aa32.95■■■□□ 2.87
ATF4-201ENST00000337304 CHMP4BQ9H444 224 aaKnown RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 NUTM2BA6NNL0 878 aaPredicted RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 NUTM2EB1AL46 878 aaPredicted RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 GIGYF1O75420 1035 aaPredicted RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 EIF2S2P20042 333 aaKnown RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 NKX1-1Q15270 411 aaPredicted RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 NUTM2AQ8IVF1 878 aaPredicted RBP32.95■■■□□ 2.87
ATF4-201ENST00000337304 DISP2A7MBM2 1401 aa32.94■■■□□ 2.86
ATF4-201ENST00000337304 FLIIQ13045 1269 aa32.94■■■□□ 2.86
ATF4-201ENST00000337304 SLC39A6Q13433 755 aa32.94■■■□□ 2.86
ATF4-201ENST00000337304 CHMP4AQ9BY43 222 aa32.94■■■□□ 2.86
ATF4-201ENST00000337304 CERKQ8TCT0 537 aa32.94■■■□□ 2.86
ATF4-201ENST00000337304 SKAP1Q86WV1 359 aa32.93■■■□□ 2.86
ATF4-201ENST00000337304 RWDD1Q9H446 243 aaPredicted RBP32.93■■■□□ 2.86
ATF4-201ENST00000337304 WNK3Q9BYP7 1800 aa32.93■■■□□ 2.86
ATF4-201ENST00000337304 CABP4P57796 275 aa32.92■■■□□ 2.86
ATF4-201ENST00000337304 DDX54Q8TDD1 881 aaKnown RBP32.92■■■□□ 2.86
ATF4-201ENST00000337304 NWD2Q9ULI1 1742 aa32.9■■■□□ 2.86
ATF4-201ENST00000337304 C5P01031 1676 aa32.89■■■□□ 2.86
ATF4-201ENST00000337304 F6X3S4 739 aa32.89■■■□□ 2.85
ATF4-201ENST00000337304 CHPF2Q9P2E5 772 aa32.89■■■□□ 2.85
ATF4-201ENST00000337304 PRAMEF22A3QJZ6 481 aa32.88■■■□□ 2.85
ATF4-201ENST00000337304 ERVV-2B6SEH9 535 aa32.88■■■□□ 2.85
ATF4-201ENST00000337304 FKBP5Q13451 457 aaPredicted RBP32.88■■■□□ 2.85
ATF4-201ENST00000337304 HDAC1Q13547 482 aaPredicted RBP32.87■■■□□ 2.85
ATF4-201ENST00000337304 PHAXQ9H814 394 aaKnown RBP32.87■■■□□ 2.85
ATF4-201ENST00000337304 JCADQ9P266 1359 aa32.86■■■□□ 2.85
ATF4-201ENST00000337304 TOGARAM1Q9Y4F4 1720 aa32.86■■■□□ 2.85
ATF4-201ENST00000337304 SLIT2O94813 1529 aa32.85■■■□□ 2.85
ATF4-201ENST00000337304 N4BP2Q86UW6 1770 aaPredicted RBP32.85■■■□□ 2.85
ATF4-201ENST00000337304 TTC5Q8N0Z6 440 aa32.84■■■□□ 2.85
ATF4-201ENST00000337304 ZNF496Q96IT1 587 aaPredicted RBP32.84■■■□□ 2.85
ATF4-201ENST00000337304 SLC4A10Q6U841 1118 aa32.84■■■□□ 2.85
ATF4-201ENST00000337304 DBF4Q9UBU7 674 aaPredicted RBP32.84■■■□□ 2.85
ATF4-201ENST00000337304 CCT4P50991 539 aaKnown RBP32.83■■■□□ 2.85
ATF4-201ENST00000337304 C1orf115Q9H7X2 142 aa32.83■■■□□ 2.85
ATF4-201ENST00000337304 MYT1Q01538 1121 aa32.82■■■□□ 2.84
ATF4-201ENST00000337304 SPATA31A1Q5TZJ5 1347 aa32.82■■■□□ 2.84
ATF4-201ENST00000337304 PAPPAQ13219 1627 aa32.82■■■□□ 2.84
ATF4-201ENST00000337304 GLI3P10071 1580 aa32.8■■■□□ 2.84
ATF4-201ENST00000337304 UBR2Q8IWV8 1755 aa32.8■■■□□ 2.84
ATF4-201ENST00000337304 PXDNLA1KZ92 1463 aa32.8■■■□□ 2.84
ATF4-201ENST00000337304 ANXA1P04083 346 aa32.8■■■□□ 2.84
ATF4-201ENST00000337304 FMNL2Q96PY5 1086 aa32.8■■■□□ 2.84
ATF4-201ENST00000337304 THRAP3Q9Y2W1 955 aaKnown RBP32.78■■■□□ 2.84
ATF4-201ENST00000337304 SNRPA1P09661 255 aaKnown RBP32.77■■■□□ 2.84
ATF4-201ENST00000337304 PROSER3Q2NL68 480 aa32.77■■■□□ 2.84
ATF4-201ENST00000337304 EXOC5O00471 708 aa32.76■■■□□ 2.83
ATF4-201ENST00000337304 MEIS3Q99687 375 aa32.76■■■□□ 2.83
ATF4-201ENST00000337304 SPATA31A5Q5VU36 1347 aa32.76■■■□□ 2.83
ATF4-201ENST00000337304 SPATA31A7Q8IWB4 1347 aa32.76■■■□□ 2.83
ATF4-201ENST00000337304 TNS2Q63HR2 1409 aa32.75■■■□□ 2.83
ATF4-201ENST00000337304 CDCA7Q9BWT1 371 aaPredicted RBP32.75■■■□□ 2.83
ATF4-201ENST00000337304 LAMB4A4D0S4 1761 aa32.75■■■□□ 2.83
ATF4-201ENST00000337304 ITGB4P16144 1822 aa32.74■■■□□ 2.83
ATF4-201ENST00000337304 PDIA6Q15084 440 aa32.74■■■□□ 2.83
ATF4-201ENST00000337304 DDX21Q9NR30 783 aaKnown RBP eCLIP32.74■■■□□ 2.83
ATF4-201ENST00000337304 PDZRN3Q9UPQ7 1066 aa32.74■■■□□ 2.83
ATF4-201ENST00000337304 RGS3P49796 1198 aa32.73■■■□□ 2.83
ATF4-201ENST00000337304 SIRT2Q8IXJ6 389 aa32.73■■■□□ 2.83
ATF4-201ENST00000337304 SMC5Q8IY18 1101 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms