RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 PLEKHG3A1L390 1219 aa12.45□□□□□ -0.42
HIF1A-202ENST00000337138 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
HIF1A-202ENST00000337138 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
HIF1A-202ENST00000337138 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
HIF1A-202ENST00000337138 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
HIF1A-202ENST00000337138 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
HIF1A-202ENST00000337138 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
HIF1A-202ENST00000337138 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
HIF1A-202ENST00000337138 R3HCC1Q9Y3T6 440 aaKnown RBP12.44□□□□□ -0.42
HIF1A-202ENST00000337138 MSH6P52701 1360 aa12.44□□□□□ -0.42
HIF1A-202ENST00000337138 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
HIF1A-202ENST00000337138 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
HIF1A-202ENST00000337138 MCM10Q7L590 875 aa12.44□□□□□ -0.42
HIF1A-202ENST00000337138 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
HIF1A-202ENST00000337138 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 CDC45O75419 566 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 DTNBO60941 627 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
HIF1A-202ENST00000337138 C5P01031 1676 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 TRIM6-TRIM34B2RNG4 842 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 GNAI1P63096 354 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 PKP1Q13835 747 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 ANKRD44Q8N8A2 993 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
HIF1A-202ENST00000337138 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
HIF1A-202ENST00000337138 MYH15Q9Y2K3 1946 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 CASC1Q6TDU7 716 aa12.42□□□□□ -0.42
HIF1A-202ENST00000337138 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
HIF1A-202ENST00000337138 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
HIF1A-202ENST00000337138 F6X3S4 739 aa12.41□□□□□ -0.42
HIF1A-202ENST00000337138 RGPD5Q99666 1765 aa12.41□□□□□ -0.42
HIF1A-202ENST00000337138 COG3Q96JB2 828 aa12.4□□□□□ -0.42
HIF1A-202ENST00000337138 CLCN1P35523 988 aa12.4□□□□□ -0.42
HIF1A-202ENST00000337138 ZGPATQ8N5A5 531 aaKnown RBP12.4□□□□□ -0.42
HIF1A-202ENST00000337138 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
HIF1A-202ENST00000337138 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
HIF1A-202ENST00000337138 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
HIF1A-202ENST00000337138 LTV1Q96GA3 475 aaPredicted RBP12.39□□□□□ -0.43
HIF1A-202ENST00000337138 DNAJC5Q9H3Z4 198 aa12.39□□□□□ -0.43
HIF1A-202ENST00000337138 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
HIF1A-202ENST00000337138 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
HIF1A-202ENST00000337138 BAG4O95429 457 aaKnown RBP12.39□□□□□ -0.43
HIF1A-202ENST00000337138 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
HIF1A-202ENST00000337138 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
HIF1A-202ENST00000337138 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
HIF1A-202ENST00000337138 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
HIF1A-202ENST00000337138 NEK4P51957 841 aa12.38□□□□□ -0.43
HIF1A-202ENST00000337138 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
HIF1A-202ENST00000337138 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
HIF1A-202ENST00000337138 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
HIF1A-202ENST00000337138 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.38□□□□□ -0.43
HIF1A-202ENST00000337138 COL18A1P39060 1754 aa12.38□□□□□ -0.43
HIF1A-202ENST00000337138 MRC1P22897 1456 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 LTKP29376 864 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 MAP4K4O95819 1239 aaPredicted RBP12.37□□□□□ -0.43
HIF1A-202ENST00000337138 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
HIF1A-202ENST00000337138 ST18O60284 1047 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 MEIS3Q99687 375 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
HIF1A-202ENST00000337138 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
HIF1A-202ENST00000337138 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
HIF1A-202ENST00000337138 PTPRCP08575 1304 aa12.36□□□□□ -0.43
HIF1A-202ENST00000337138 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
HIF1A-202ENST00000337138 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
HIF1A-202ENST00000337138 ALS2Q96Q42 1657 aa12.36□□□□□ -0.43
HIF1A-202ENST00000337138 SLIT3O75094 1523 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 SDSP20132 328 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 IL25Q9H293 177 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 PDLIM2Q96JY6 352 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 LMBRD1Q9NUN5 540 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 SYCE3A1L190 88 aa12.35□□□□□ -0.43
HIF1A-202ENST00000337138 RTF1Q92541 710 aaKnown RBP12.35□□□□□ -0.43
HIF1A-202ENST00000337138 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-202ENST00000337138 TNRQ92752 1358 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 MST1RQ04912 1400 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 SBNO1A3KN83 1393 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 ANKARQ7Z5J8 1434 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 ACEP12821 1306 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 ZNF445P59923 1031 aa12.34□□□□□ -0.43
HIF1A-202ENST00000337138 TPM2P07951 284 aa12.33□□□□□ -0.43
HIF1A-202ENST00000337138 RABEP1Q15276 862 aa12.33□□□□□ -0.43
HIF1A-202ENST00000337138 G2E3Q7L622 706 aa12.33□□□□□ -0.43
HIF1A-202ENST00000337138 FOXO3O43524 673 aa12.33□□□□□ -0.44
HIF1A-202ENST00000337138 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
HIF1A-202ENST00000337138 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.44
HIF1A-202ENST00000337138 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
HIF1A-202ENST00000337138 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
HIF1A-202ENST00000337138 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-202ENST00000337138 TSPYL4Q9UJ04 414 aa12.32□□□□□ -0.44
HIF1A-202ENST00000337138 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
HIF1A-202ENST00000337138 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms