RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 TPD52L1Q16890 204 aaPredicted RBP10.14□□□□□ -0.79
TDP1-201ENST00000335725 DUSP27Q5VZP5 1158 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 ST5P78524 1137 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 GOLGA2Q08379 1002 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 NUB1Q9Y5A7 615 aa10.14□□□□□ -0.79
TDP1-201ENST00000335725 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
TDP1-201ENST00000335725 MYBL2P10244 700 aa10.13□□□□□ -0.79
TDP1-201ENST00000335725 PSMD2Q13200 908 aa10.13□□□□□ -0.79
TDP1-201ENST00000335725 DNAJC14Q6Y2X3 702 aaPredicted RBP10.13□□□□□ -0.79
TDP1-201ENST00000335725 ANKRD18AQ8IVF6 992 aa10.13□□□□□ -0.79
TDP1-201ENST00000335725 CCDC171Q6TFL3 1326 aa10.13□□□□□ -0.79
TDP1-201ENST00000335725 ELP1O95163 1332 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 KCNF1Q9H3M0 494 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 A0A1B0GUA9 196 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 PES1O00541 588 aaKnown RBP10.12□□□□□ -0.79
TDP1-201ENST00000335725 OAS2P29728 719 aaKnown RBP10.12□□□□□ -0.79
TDP1-201ENST00000335725 GRIK3Q13003 919 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 EXOC8Q8IYI6 725 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 CLIP2Q9UDT6 1046 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 PRPHP41219 470 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 YEATS2Q9ULM3 1422 aa10.12□□□□□ -0.79
TDP1-201ENST00000335725 SNUPNO95149 360 aaKnown RBP10.11□□□□□ -0.79
TDP1-201ENST00000335725 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
TDP1-201ENST00000335725 CRACR2AQ9BSW2 395 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 ERLIN2O94905 339 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 RPS6KA3P51812 740 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 DDX46Q7L014 1031 aaKnown RBP10.11□□□□□ -0.79
TDP1-201ENST00000335725 THOC2Q8NI27 1593 aaKnown RBP10.11□□□□□ -0.79
TDP1-201ENST00000335725 LRRC9Q6ZRR7 1453 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 HFM1A2PYH4 1435 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 CLCN6P51797 869 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 TBC1D8BQ0IIM8 1120 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 MYBPC2Q14324 1141 aa10.11□□□□□ -0.79
TDP1-201ENST00000335725 CDKL5O76039 1030 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 ZNF483Q8TF39 744 aaPredicted RBP10.1□□□□□ -0.79
TDP1-201ENST00000335725 IL16Q14005 1332 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
TDP1-201ENST00000335725 UBXN6Q9BZV1 441 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 PDRG1Q9NUG6 133 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 IGF1RP08069 1367 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 ZRANB2O95218 330 aaKnown RBP eCLIP10.1□□□□□ -0.79
TDP1-201ENST00000335725 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 DRAXINQ8NBI3 349 aaPredicted RBP10.1□□□□□ -0.79
TDP1-201ENST00000335725 ACRBPQ8NEB7 543 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 ADAM21Q9UKJ8 722 aa10.1□□□□□ -0.79
TDP1-201ENST00000335725 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 HNRNPH1P31943 449 aaKnown RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 SMC1AQ14683 1233 aaKnown RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 N4BP2L2Q92802 583 aaPredicted RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 GOLGA6BA6NDN3 693 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 RLBP1P12271 317 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 SLC5A9Q2M3M2 681 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 NFXL1Q6ZNB6 911 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 BAG1Q99933 345 aaPredicted RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
TDP1-201ENST00000335725 KIF2CQ99661 725 aa10.09□□□□□ -0.79
TDP1-201ENST00000335725 NAP1L1P55209 391 aaKnown RBP10.08□□□□□ -0.8
TDP1-201ENST00000335725 MCM6Q14566 821 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 REXO1L1PQ8IX06 675 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 UTP14AQ9BVJ6 771 aaKnown RBP10.08□□□□□ -0.8
TDP1-201ENST00000335725 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 AMOTQ4VCS5 1084 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 LARP6Q9BRS8 491 aaKnown RBP10.08□□□□□ -0.8
TDP1-201ENST00000335725 IMPDH2P12268 514 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 PECAM1P16284 738 aaPredicted RBP10.08□□□□□ -0.8
TDP1-201ENST00000335725 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
TDP1-201ENST00000335725 MAF1Q9H063 256 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
TDP1-201ENST00000335725 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.08□□□□□ -0.8
TDP1-201ENST00000335725 MCM8Q9UJA3 840 aa10.08□□□□□ -0.8
TDP1-201ENST00000335725 DDR1Q08345 913 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 PROCA1Q8NCQ7 364 aaPredicted RBP10.07□□□□□ -0.8
TDP1-201ENST00000335725 JPH2Q9BR39 696 aaPredicted RBP10.07□□□□□ -0.8
TDP1-201ENST00000335725 NEMFO60524 1076 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 TUBB4AP04350 444 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 GCKP35557 465 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 MRPL12P52815 198 aaKnown RBP10.07□□□□□ -0.8
TDP1-201ENST00000335725 CCDC183Q5T5S1 534 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 MROH2BQ7Z745 1585 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
TDP1-201ENST00000335725 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms