RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 ABCC2Q92887 1545 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 SPATA31A6Q5VVP1 1343 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 ASXL2Q76L83 1435 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 PLIN1O60240 522 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 SULF1Q8IWU6 871 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 ZC3H12CQ9C0D7 883 aaKnown RBP4.55□□□□□ -1.68
KNTC1-201ENST00000333479 BCS1LQ9Y276 419 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 TBX22Q9Y458 520 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 PRC1O43663 620 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 SRGAP2BP0DMP2 458 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 ATP6V1AP38606 617 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 NBR1Q14596 966 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 ODR4Q5SWX8 454 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 CDC37L1Q7L3B6 337 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 C2orf69Q8N8R5 385 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 GJA3Q9Y6H8 435 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 TTC21BQ7Z4L5 1316 aa4.55□□□□□ -1.68
KNTC1-201ENST00000333479 LARGE2Q8N3Y3 721 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 HOMER2Q9NSB8 354 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 SEC63Q9UGP8 760 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 KIF20AO95235 890 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 USP48Q86UV5 1035 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 CCDC12Q8WUD4 166 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 NUDT16Q96DE0 195 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 CHMP5Q9NZZ3 219 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 NAIPQ13075 1403 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PLEKHH1Q9ULM0 1364 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 VIMP08670 466 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 HSPA1LP34931 641 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 ANKRD18AQ8IVF6 992 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 WASF1Q92558 559 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PDCL3Q9H2J4 239 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 TRMT112Q9UI30 125 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 NOL7Q9UMY1 257 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PPIP5K1Q6PFW1 1433 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PCDH11XQ9BZA7 1347 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PCDH11YQ9BZA8 1340 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PSMA5P28066 241 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 MATR3P43243 847 aaKnown RBP eCLIP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 BIRC2Q13490 618 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 SPATA32Q96LK8 384 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 ZNF408Q9H9D4 720 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 RTEL1Q9NZ71 1219 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 UBXN2AP68543 259 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 MBIPQ9NS73 344 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 MYO6Q9UM54 1294 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 ZNF518AQ6AHZ1 1483 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 DHX29Q7Z478 1369 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 HMGB3O15347 200 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 PARP10Q53GL7 1025 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 LARP1Q6PKG0 1096 aaKnown RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 STXBP4Q6ZWJ1 553 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 ZBTB33Q86T24 672 aa4.54□□□□□ -1.68
KNTC1-201ENST00000333479 CCDC97Q96F63 343 aaPredicted RBP4.54□□□□□ -1.68
KNTC1-201ENST00000333479 RAD50Q92878 1312 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 ATP5J2-PTCD1G3V325 749 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 PPP1R12BO60237 982 aaPredicted RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 PTCD1O75127 700 aaKnown RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 MPRIPQ6WCQ1 1025 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 SLAIN2Q9P270 581 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 CDKL5O76039 1030 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 CCDC173Q0VFZ6 552 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 BTBD11A6QL63 1104 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 FOXO3O43524 673 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 ST18O60284 1047 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 NOLC1Q14978 699 aaKnown RBP eCLIP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 CLASRPQ8N2M8 674 aaKnown RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 SPRYD3Q8NCJ5 442 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 SLC17A8Q8NDX2 589 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 SLKQ9H2G2 1235 aaPredicted RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 RNF41Q9H4P4 317 aaPredicted RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 ZKSCAN2Q63HK3 967 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 USP37Q86T82 979 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 GOLGA6L1Q8N7Z2 621 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 LBHD1Q9BQE6 289 aaPredicted RBP4.53□□□□□ -1.68
KNTC1-201ENST00000333479 FERMT1Q9BQL6 677 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 RAB34Q9BZG1 259 aa4.53□□□□□ -1.68
KNTC1-201ENST00000333479 UQCRFS1P1P0C7P4 283 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 CDR1P51861 262 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 HOMEZQ8IX15 550 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 ZNHIT6Q9NWK9 470 aaKnown RBP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 BAG4O95429 457 aaKnown RBP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 TTF1Q15361 905 aaPredicted RBP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 SRCIN1Q9C0H9 1055 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 ATP10AO60312 1499 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 FANCIQ9NVI1 1328 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 MAP3K12Q12852 859 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 IPO9Q96P70 1041 aaKnown RBP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 ZMYND15Q9H091 742 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 TRPM2O94759 1503 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 ERBINQ96RT1 1412 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 JCADQ9P266 1359 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 DKC1O60832 514 aaKnown RBP eCLIP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 REC8O95072 547 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 CETN2P41208 172 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 ZNF444Q8N0Y2 327 aaPredicted RBP4.52□□□□□ -1.69
KNTC1-201ENST00000333479 UBAC1Q9BSL1 405 aa4.52□□□□□ -1.69
KNTC1-201ENST00000333479 HAUS2Q9NVX0 235 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms