RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
LIMK2-201ENST00000331728 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 PIK3C2BO00750 1634 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 ESYT1Q9BSJ8 1104 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.55□□□□□ -0.72
LIMK2-201ENST00000331728 AATKQ6ZMQ8 1374 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 CYB5RLQ6IPT4 315 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 IL1RAPL2Q9NP60 686 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 ARHGEF40Q8TER5 1519 aa10.55□□□□□ -0.72
LIMK2-201ENST00000331728 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
LIMK2-201ENST00000331728 SURF6O75683 361 aaKnown RBP10.54□□□□□ -0.72
LIMK2-201ENST00000331728 G2E3Q7L622 706 aa10.54□□□□□ -0.72
LIMK2-201ENST00000331728 SRCIN1Q9C0H9 1055 aa10.54□□□□□ -0.72
LIMK2-201ENST00000331728 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
LIMK2-201ENST00000331728 CDC42BPGQ6DT37 1551 aa10.54□□□□□ -0.72
LIMK2-201ENST00000331728 ZDHHC9Q9Y397 364 aa10.54□□□□□ -0.72
LIMK2-201ENST00000331728 ALKQ9UM73 1620 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 FLIIQ13045 1269 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 ATP6V1DQ9Y5K8 247 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 MAP4K4O95819 1239 aaPredicted RBP10.53□□□□□ -0.72
LIMK2-201ENST00000331728 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 ACEP12821 1306 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 EIF2S2P20042 333 aaKnown RBP10.53□□□□□ -0.72
LIMK2-201ENST00000331728 MPNDQ8N594 471 aa10.53□□□□□ -0.72
LIMK2-201ENST00000331728 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
LIMK2-201ENST00000331728 FOXO3O43524 673 aa10.52□□□□□ -0.72
LIMK2-201ENST00000331728 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.72
LIMK2-201ENST00000331728 KIF20BQ96Q89 1820 aa10.52□□□□□ -0.73
LIMK2-201ENST00000331728 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
LIMK2-201ENST00000331728 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
LIMK2-201ENST00000331728 CPSF1Q10570 1443 aaKnown RBP10.52□□□□□ -0.73
LIMK2-201ENST00000331728 DIP2CQ9Y2E4 1556 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 FIBPO43427 364 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 ANAPC15P60006 121 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
LIMK2-201ENST00000331728 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
LIMK2-201ENST00000331728 CHAF1AQ13111 956 aaPredicted RBP10.51□□□□□ -0.73
LIMK2-201ENST00000331728 MTHFSDQ2M296 383 aaKnown RBP10.51□□□□□ -0.73
LIMK2-201ENST00000331728 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.51□□□□□ -0.73
LIMK2-201ENST00000331728 CHMLP26374 656 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 GPATCH3Q96I76 525 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 PPP6R1Q9UPN7 881 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 NLRP6P59044 892 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 ATP10DQ9P241 1426 aa10.5□□□□□ -0.73
LIMK2-201ENST00000331728 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
LIMK2-201ENST00000331728 ATP8B2P98198 1209 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 FAM184AQ8NB25 1140 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 INTS4Q96HW7 963 aaKnown RBP10.49□□□□□ -0.73
LIMK2-201ENST00000331728 BRD1O95696 1058 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 SMAP1Q8IYB5 467 aaPredicted RBP10.49□□□□□ -0.73
LIMK2-201ENST00000331728 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 PALD1Q9ULE6 856 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 EID1Q9Y6B2 187 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 SIGLEC1Q9BZZ2 1709 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 SRGAP3O43295 1099 aa10.49□□□□□ -0.73
LIMK2-201ENST00000331728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
LIMK2-201ENST00000331728 GNAT3A8MTJ3 354 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 OSBPL3Q9H4L5 887 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 METP08581 1390 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 CLTCQ00610 1675 aaKnown RBP10.48□□□□□ -0.73
LIMK2-201ENST00000331728 PNMA6EA0A0J9YXQ4 647 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 USP25Q9UHP3 1055 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 LETM1O95202 739 aaPredicted RBP10.48□□□□□ -0.73
LIMK2-201ENST00000331728 CCDC183Q5T5S1 534 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 MAP3K19Q56UN5 1328 aa10.48□□□□□ -0.73
LIMK2-201ENST00000331728 CWC27Q6UX04 472 aaKnown RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 GOLGA6L6A8MZA4 724 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 ZKSCAN1P17029 563 aaPredicted RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 DRC7Q8IY82 874 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 RAB11FIP3O75154 756 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
LIMK2-201ENST00000331728 KIF1BPQ96EK5 621 aa10.47□□□□□ -0.73
LIMK2-201ENST00000331728 TMEM131LA2VDJ0 1609 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 TEFQ10587 303 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 CLASRPQ8N2M8 674 aaKnown RBP10.46□□□□□ -0.73
LIMK2-201ENST00000331728 MYRIPQ8NFW9 859 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
LIMK2-201ENST00000331728 PRDM4Q9UKN5 801 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 CUL4AQ13619 759 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 UVSSAQ2YD98 709 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
LIMK2-201ENST00000331728 PRIMPOLQ96LW4 560 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms