RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 CFAP70Q5T0N1 1121 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 ZNF710Q8N1W2 664 aa3.61□□□□□ -1.83
RGPD6-201ENST00000329516 CASP7P55210 303 aa3.61□□□□□ -1.83
RGPD6-201ENST00000329516 PDLIM2Q96JY6 352 aa3.61□□□□□ -1.83
RGPD6-201ENST00000329516 COL1A1P02452 1464 aaPredicted RBP3.61□□□□□ -1.83
RGPD6-201ENST00000329516 FBN2P35556 2912 aa3.61□□□□□ -1.83
RGPD6-201ENST00000329516 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.61□□□□□ -1.83
RGPD6-201ENST00000329516 TPRNQ4KMQ1 711 aa3.61□□□□□ -1.83
RGPD6-201ENST00000329516 NCBP3Q53F19 620 aaKnown RBP3.61□□□□□ -1.83
RGPD6-201ENST00000329516 ROCK2O75116 1388 aaKnown RBP3.61□□□□□ -1.83
RGPD6-201ENST00000329516 PANK2Q9BZ23 570 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 CHADLQ6NUI6 762 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 ZNF384Q8TF68 577 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 ZEB1P37275 1124 aaPredicted RBP3.6□□□□□ -1.83
RGPD6-201ENST00000329516 NBPF6Q5VWK0 638 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 NBPF4Q96M43 638 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 ZBTB40Q9NUA8 1239 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 SLX4Q8IY92 1834 aa3.6□□□□□ -1.83
RGPD6-201ENST00000329516 SETD1BQ9UPS6 1966 aaKnown RBP3.6□□□□□ -1.83
RGPD6-201ENST00000329516 ADD1P35611 737 aaKnown RBP3.59□□□□□ -1.83
RGPD6-201ENST00000329516 ABCC4O15439 1325 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 NINLQ9Y2I6 1382 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 OTUD7AQ8TE49 926 aaPredicted RBP3.59□□□□□ -1.83
RGPD6-201ENST00000329516 LRRC15Q8TF66 581 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 A0A0G2JLW4 131 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 ZNF638Q14966 1978 aaKnown RBP3.59□□□□□ -1.83
RGPD6-201ENST00000329516 MYH1P12882 1939 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 ILDR1Q86SU0 546 aaPredicted RBP3.59□□□□□ -1.83
RGPD6-201ENST00000329516 UBXN6Q9BZV1 441 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 PLEKHG2Q9H7P9 1386 aa3.59□□□□□ -1.83
RGPD6-201ENST00000329516 RSPH6AQ9H0K4 717 aa3.59□□□□□ -1.84
RGPD6-201ENST00000329516 DPY19L2P1Q6NXN4 242 aa3.59□□□□□ -1.84
RGPD6-201ENST00000329516 TNS1Q9HBL0 1735 aaKnown RBP3.59□□□□□ -1.84
RGPD6-201ENST00000329516 RPAP1Q9BWH6 1393 aaPredicted RBP3.59□□□□□ -1.84
RGPD6-201ENST00000329516 SMIM22K7EJ46 135 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 UNC5CLQ8IV45 518 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 IL13P35225 146 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 SLC4A9Q96Q91 983 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 ZANQ9Y493 2812 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 FBXO31Q5XUX0 539 aaPredicted RBP3.58□□□□□ -1.84
RGPD6-201ENST00000329516 SMC5Q8IY18 1101 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 CHIC2Q9UKJ5 165 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 HMGB3O15347 200 aaKnown RBP3.58□□□□□ -1.84
RGPD6-201ENST00000329516 IRX6P78412 446 aaPredicted RBP3.58□□□□□ -1.84
RGPD6-201ENST00000329516 B4GALNT3Q6L9W6 998 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 ERICH6Q7L0X2 663 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 KCNB2Q92953 911 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 POLKQ9UBT6 870 aa3.58□□□□□ -1.84
RGPD6-201ENST00000329516 SSC5DA1L4H1 1573 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ZNF292O60281 2723 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ZBTB7BO15156 539 aaPredicted RBP3.57□□□□□ -1.84
RGPD6-201ENST00000329516 WWC1Q8IX03 1113 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ANKRD36BQ8N2N9 1353 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ZSCAN20P17040 1043 aaPredicted RBP3.57□□□□□ -1.84
RGPD6-201ENST00000329516 PRAM1Q96QH2 718 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 NBPF3Q9H094 633 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ANAPC1Q9H1A4 1944 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 KAT6BQ8WYB5 2073 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 CCDC27Q2M243 656 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 ECM1Q16610 540 aa3.57□□□□□ -1.84
RGPD6-201ENST00000329516 SIP14410 1827 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 USP26Q9BXU7 913 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 SLC12A5Q9H2X9 1139 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 USP6P35125 1406 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 LMOD2Q6P5Q4 547 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 APTXQ7Z2E3 356 aaKnown RBP3.56□□□□□ -1.84
RGPD6-201ENST00000329516 GTF2E1P29083 439 aaPredicted RBP3.56□□□□□ -1.84
RGPD6-201ENST00000329516 RARSP54136 660 aaKnown RBP3.56□□□□□ -1.84
RGPD6-201ENST00000329516 SLC35G1Q2M3R5 365 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 SLC52A1Q9NWF4 448 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 AXIN2Q9Y2T1 843 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 WTIPA6NIX2 430 aaPredicted RBP3.56□□□□□ -1.84
RGPD6-201ENST00000329516 RBM42Q9BTD8 480 aaKnown RBP3.56□□□□□ -1.84
RGPD6-201ENST00000329516 USP35Q9P2H5 1018 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 ARTNQ5T4W7 220 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 BCANQ96GW7 911 aa3.56□□□□□ -1.84
RGPD6-201ENST00000329516 RAPGEF3O95398 923 aa3.55□□□□□ -1.84
RGPD6-201ENST00000329516 BORCS6Q96GS4 357 aa3.55□□□□□ -1.84
RGPD6-201ENST00000329516 DTNBO60941 627 aa3.55□□□□□ -1.84
RGPD6-201ENST00000329516 PLPPR3Q6T4P5 718 aa3.55□□□□□ -1.84
RGPD6-201ENST00000329516 IFIT2P09913 472 aaKnown RBP3.55□□□□□ -1.84
RGPD6-201ENST00000329516 TMEM51Q9NW97 253 aa3.55□□□□□ -1.84
RGPD6-201ENST00000329516 TTC21BQ7Z4L5 1316 aa3.54□□□□□ -1.84
RGPD6-201ENST00000329516 MYH2Q9UKX2 1941 aa3.54□□□□□ -1.84
RGPD6-201ENST00000329516 RIMS2Q9UQ26 1411 aa3.54□□□□□ -1.84
RGPD6-201ENST00000329516 RRP1P56182 461 aaKnown RBP3.54□□□□□ -1.84
RGPD6-201ENST00000329516 PTPRFP10586 1907 aa3.54□□□□□ -1.84
RGPD6-201ENST00000329516 EVX2Q03828 476 aa3.54□□□□□ -1.84
RGPD6-201ENST00000329516 VAMP4O75379 141 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 UBTFP17480 764 aaKnown RBP3.53□□□□□ -1.84
RGPD6-201ENST00000329516 VWFP04275 2813 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 APPP05067 770 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 CHRM1P11229 460 aaPredicted RBP3.53□□□□□ -1.84
RGPD6-201ENST00000329516 DEKP35659 375 aaKnown RBP3.53□□□□□ -1.84
RGPD6-201ENST00000329516 POGKQ9P215 609 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 BAZ2AQ9UIF9 1905 aaKnown RBP3.53□□□□□ -1.84
RGPD6-201ENST00000329516 BDP1A6H8Y1 2624 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 PLXNA4Q9HCM2 1894 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 PIEZO2Q9H5I5 2752 aa3.53□□□□□ -1.84
RGPD6-201ENST00000329516 EPHA10Q5JZY3 1008 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms