RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
TUBB-205ENST00000327892 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
TUBB-205ENST00000327892 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
TUBB-205ENST00000327892 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
TUBB-205ENST00000327892 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
TUBB-205ENST00000327892 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
TUBB-205ENST00000327892 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
TUBB-205ENST00000327892 IGSF3O75054 1194 aa12.3□□□□□ -0.44
TUBB-205ENST00000327892 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
TUBB-205ENST00000327892 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
TUBB-205ENST00000327892 TCHHQ07283 1943 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 AP5Z1O43299 807 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 RAPGEF3O95398 923 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
TUBB-205ENST00000327892 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
TUBB-205ENST00000327892 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
TUBB-205ENST00000327892 CHMLP26374 656 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
TUBB-205ENST00000327892 GIMAP6Q6P9H5 292 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 AGLP35573 1532 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 KIF3AQ9Y496 699 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 RGS12O14924 1447 aa12.28□□□□□ -0.44
TUBB-205ENST00000327892 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 MCM2P49736 904 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 DMTNQ08495 405 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 FBXO41Q8TF61 875 aa12.27□□□□□ -0.44
TUBB-205ENST00000327892 INTS4Q96HW7 963 aaKnown RBP12.27□□□□□ -0.44
TUBB-205ENST00000327892 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
TUBB-205ENST00000327892 CHL1O00533 1208 aa12.27□□□□□ -0.45
TUBB-205ENST00000327892 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
TUBB-205ENST00000327892 PRIMPOLQ96LW4 560 aa12.27□□□□□ -0.45
TUBB-205ENST00000327892 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.45
TUBB-205ENST00000327892 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
TUBB-205ENST00000327892 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
TUBB-205ENST00000327892 PYCARDQ9ULZ3 195 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 LMTK2Q8IWU2 1503 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 FIBPO43427 364 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 KDM4AO75164 1064 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 HMMRO75330 724 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 MX1P20591 662 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 HMGN5P82970 282 aaKnown RBP12.26□□□□□ -0.45
TUBB-205ENST00000327892 ABCC3O15438 1527 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
TUBB-205ENST00000327892 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 PHF14O94880 888 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 CPA1P15085 419 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 MCCP23508 829 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 IL1RAPL2Q9NP60 686 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
TUBB-205ENST00000327892 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
TUBB-205ENST00000327892 SOX12O15370 315 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 FOXO3O43524 673 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 LRRCC1Q9C099 1032 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 CHMP3Q9Y3E7 222 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 ZFYVE9O95405 1425 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
TUBB-205ENST00000327892 FKBP5Q13451 457 aaPredicted RBP12.24□□□□□ -0.45
TUBB-205ENST00000327892 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 SIGLEC1Q9BZZ2 1709 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
TUBB-205ENST00000327892 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
TUBB-205ENST00000327892 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.452e-8■■■■■ 31
TUBB-205ENST00000327892 UVSSAQ2YD98 709 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 SYT1P21579 422 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 COG3Q96JB2 828 aa12.24□□□□□ -0.45
TUBB-205ENST00000327892 GNAI2P04899 355 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 SPTLC3Q9NUV7 552 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 KIAA1524Q8TCG1 905 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 DDX54Q8TDD1 881 aaKnown RBP12.23□□□□□ -0.45
TUBB-205ENST00000327892 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
TUBB-205ENST00000327892 PTPRCP08575 1304 aa12.22□□□□□ -0.45
TUBB-205ENST00000327892 ZSCAN22P10073 491 aaPredicted RBP12.22□□□□□ -0.45
TUBB-205ENST00000327892 ANAPC15P60006 121 aa12.22□□□□□ -0.45
TUBB-205ENST00000327892 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
TUBB-205ENST00000327892 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
TUBB-205ENST00000327892 PDCL2Q8N4E4 241 aa12.22□□□□□ -0.45
TUBB-205ENST00000327892 STX6O43752 255 aa12.22□□□□□ -0.45
TUBB-205ENST00000327892 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
TUBB-205ENST00000327892 RPAP1Q9BWH6 1393 aaPredicted RBP12.21□□□□□ -0.45
TUBB-205ENST00000327892 AK2P54819 239 aa12.21□□□□□ -0.45
TUBB-205ENST00000327892 UBE2HP62256 183 aa12.21□□□□□ -0.45
TUBB-205ENST00000327892 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
TUBB-205ENST00000327892 SLC52A1Q9NWF4 448 aa12.21□□□□□ -0.45
TUBB-205ENST00000327892 NAA30Q147X3 362 aaPredicted RBP12.21□□□□□ -0.46
TUBB-205ENST00000327892 CAMK4Q16566 473 aa12.21□□□□□ -0.46
TUBB-205ENST00000327892 RUFY3Q7L099 469 aa12.21□□□□□ -0.46
TUBB-205ENST00000327892 LARGE1O95461 756 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms