RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-201ENST00000326335 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 HMMRO75330 724 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 AAMPQ13685 434 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
CUL4A-201ENST00000326335 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
CUL4A-201ENST00000326335 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
CUL4A-201ENST00000326335 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
CUL4A-201ENST00000326335 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
CUL4A-201ENST00000326335 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
CUL4A-201ENST00000326335 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
CUL4A-201ENST00000326335 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
CUL4A-201ENST00000326335 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
CUL4A-201ENST00000326335 TTC22Q5TAA0 569 aa13.12□□□□□ -0.31
CUL4A-201ENST00000326335 IP6K1Q92551 441 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 SSFA2P28290 1259 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 PKP1Q13835 747 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
CUL4A-201ENST00000326335 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
CUL4A-201ENST00000326335 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
CUL4A-201ENST00000326335 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
CUL4A-201ENST00000326335 NEK4P51957 841 aa13.1□□□□□ -0.31
CUL4A-201ENST00000326335 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
CUL4A-201ENST00000326335 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
CUL4A-201ENST00000326335 PDE1AP54750 535 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
CUL4A-201ENST00000326335 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 CHMP5Q9NZZ3 219 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 CPA1P15085 419 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
CUL4A-201ENST00000326335 CRB1P82279 1406 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 PTPRCP08575 1304 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
CUL4A-201ENST00000326335 TECPR2O15040 1411 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
CUL4A-201ENST00000326335 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
CUL4A-201ENST00000326335 MX1P20591 662 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 MCM4P33991 863 aa13.08□□□□□ -0.32
CUL4A-201ENST00000326335 TNPO1Q92973 898 aaKnown RBP13.08□□□□□ -0.32
CUL4A-201ENST00000326335 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
CUL4A-201ENST00000326335 GNAI3P08754 354 aa13.07□□□□□ -0.32
CUL4A-201ENST00000326335 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
CUL4A-201ENST00000326335 TRAK2O60296 914 aa13.07□□□□□ -0.32
CUL4A-201ENST00000326335 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
CUL4A-201ENST00000326335 DNAAF4Q8WXU2 420 aa13.07□□□□□ -0.32
CUL4A-201ENST00000326335 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 ITSN1Q15811 1721 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 PPFIA3O75145 1194 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 KIF2CQ99661 725 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
CUL4A-201ENST00000326335 SOS1Q07889 1333 aaPredicted RBP13.06□□□□□ -0.32
CUL4A-201ENST00000326335 KCNJ4P48050 445 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
CUL4A-201ENST00000326335 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
CUL4A-201ENST00000326335 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
CUL4A-201ENST00000326335 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 IL25Q9H293 177 aa13.05□□□□□ -0.32
CUL4A-201ENST00000326335 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
CUL4A-201ENST00000326335 EDC3Q96F86 508 aaKnown RBP13.04□□□□□ -0.32
CUL4A-201ENST00000326335 MYD88Q99836 296 aa13.04□□□□□ -0.32
CUL4A-201ENST00000326335 C3P01024 1663 aa13.04□□□□□ -0.32
CUL4A-201ENST00000326335 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
CUL4A-201ENST00000326335 EIF5BO60841 1220 aaKnown RBP13.04□□□□□ -0.32
CUL4A-201ENST00000326335 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
CUL4A-201ENST00000326335 USP16Q9Y5T5 823 aa13.04□□□□□ -0.32
CUL4A-201ENST00000326335 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
CUL4A-201ENST00000326335 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
CUL4A-201ENST00000326335 GDPD2Q9HCC8 539 aa13.03□□□□□ -0.32
CUL4A-201ENST00000326335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-201ENST00000326335 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-201ENST00000326335 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
CUL4A-201ENST00000326335 ANKRD26Q9UPS8 1709 aa13.03□□□□□ -0.32
CUL4A-201ENST00000326335 ERC2O15083 957 aa13.02□□□□□ -0.32
CUL4A-201ENST00000326335 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.32
CUL4A-201ENST00000326335 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms