RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PHAXQ9H814 394 aaKnown RBP21.4■■□□□ 1.02
COL9A1-201ENST00000320755 NCLP19338 710 aaKnown RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 MRE11P49959 708 aa21.39■■□□□ 1.01
COL9A1-201ENST00000320755 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 GAS2L3Q86XJ1 694 aa21.39■■□□□ 1.01
COL9A1-201ENST00000320755 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.01
COL9A1-201ENST00000320755 FOXD4L5Q5VV16 416 aaPredicted RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 NOL8Q76FK4 1167 aaKnown RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 ZGPATQ8N5A5 531 aaKnown RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 FOXD4L4Q8WXT5 416 aaPredicted RBP21.39■■□□□ 1.01
COL9A1-201ENST00000320755 SETD1BQ9UPS6 1966 aaKnown RBP21.38■■□□□ 1.01
COL9A1-201ENST00000320755 GOLGA6L22H0YM25 854 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 IL1RAPL2Q9NP60 686 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 ST18O60284 1047 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 GNAI3P08754 354 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 MCTP1Q6DN14 999 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
COL9A1-201ENST00000320755 BAG4O95429 457 aaKnown RBP21.37■■□□□ 1.01
COL9A1-201ENST00000320755 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
COL9A1-201ENST00000320755 EIF5BO60841 1220 aaKnown RBP21.37■■□□□ 1.01
COL9A1-201ENST00000320755 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
COL9A1-201ENST00000320755 MX1P20591 662 aa21.36■■□□□ 1.01
COL9A1-201ENST00000320755 NALCNQ8IZF0 1738 aa21.36■■□□□ 1.01
COL9A1-201ENST00000320755 NEK4P51957 841 aa21.35■■□□□ 1.01
COL9A1-201ENST00000320755 ANXA1P04083 346 aa21.35■■□□□ 1.01
COL9A1-201ENST00000320755 ATP8B2P98198 1209 aa21.35■■□□□ 1.01
COL9A1-201ENST00000320755 SKOR2Q2VWA4 1001 aaPredicted RBP21.35■■□□□ 1.01
COL9A1-201ENST00000320755 UBTFL1P0CB47 393 aaPredicted RBP21.35■■□□□ 1.01
COL9A1-201ENST00000320755 LGR6Q9HBX8 967 aa21.35■■□□□ 1.01
COL9A1-201ENST00000320755 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
COL9A1-201ENST00000320755 HTATSF1O43719 755 aaKnown RBP21.34■■□□□ 1.01
COL9A1-201ENST00000320755 CHAMP1Q96JM3 812 aa21.34■■□□□ 1.01
COL9A1-201ENST00000320755 USP44Q9H0E7 712 aa21.34■■□□□ 1.01
COL9A1-201ENST00000320755 ANO2Q9NQ90 1003 aa21.34■■□□□ 1.01
COL9A1-201ENST00000320755 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
COL9A1-201ENST00000320755 LMOD2Q6P5Q4 547 aa21.34■■□□□ 1.01
COL9A1-201ENST00000320755 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
COL9A1-201ENST00000320755 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
COL9A1-201ENST00000320755 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1
COL9A1-201ENST00000320755 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
COL9A1-201ENST00000320755 NBPF4Q96M43 638 aa21.32■■□□□ 1
COL9A1-201ENST00000320755 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
COL9A1-201ENST00000320755 UNC5CLQ8IV45 518 aa21.32■■□□□ 1
COL9A1-201ENST00000320755 OSBPL3Q9H4L5 887 aa21.32■■□□□ 1
COL9A1-201ENST00000320755 KCNQ3O43525 872 aa21.31■■□□□ 1
COL9A1-201ENST00000320755 PSME1Q06323 249 aa21.31■■□□□ 1
COL9A1-201ENST00000320755 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
COL9A1-201ENST00000320755 PIK3C2AO00443 1686 aa21.31■■□□□ 1
COL9A1-201ENST00000320755 SURF6O75683 361 aaKnown RBP21.31■■□□□ 1
COL9A1-201ENST00000320755 NUCB2P80303 420 aa21.31■■□□□ 1
COL9A1-201ENST00000320755 FMN2Q9NZ56 1722 aa21.31■■□□□ 1
COL9A1-201ENST00000320755 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
COL9A1-201ENST00000320755 PALD1Q9ULE6 856 aa21.3■■□□□ 1
COL9A1-201ENST00000320755 PPP1R42Q7Z4L9 355 aa21.29■■□□□ 1
COL9A1-201ENST00000320755 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
COL9A1-201ENST00000320755 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
COL9A1-201ENST00000320755 ARHGAP23Q9P227 1491 aa21.28■■□□□ 1
COL9A1-201ENST00000320755 CHMLP26374 656 aa21.27■■□□□ 1
COL9A1-201ENST00000320755 CAVIN1Q6NZI2 390 aaKnown RBP21.27■■□□□ 1
COL9A1-201ENST00000320755 UPF3BQ9BZI7 483 aaKnown RBP21.27■■□□□ 1
COL9A1-201ENST00000320755 SRCIN1Q9C0H9 1055 aa21.27■■□□□ 1
COL9A1-201ENST00000320755 PRPF40AO75400 957 aaKnown RBP21.27■■□□□ 1
COL9A1-201ENST00000320755 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
COL9A1-201ENST00000320755 PTMSP20962 102 aa21.27■■□□□ 1
COL9A1-201ENST00000320755 SRGAP3O43295 1099 aa21.27■□□□□ 0.99
COL9A1-201ENST00000320755 IBTKQ9P2D0 1353 aaPredicted RBP21.27■□□□□ 0.99
COL9A1-201ENST00000320755 SLIT1O75093 1534 aa21.26■□□□□ 0.99
COL9A1-201ENST00000320755 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
COL9A1-201ENST00000320755 TEFQ10587 303 aa21.26■□□□□ 0.99
COL9A1-201ENST00000320755 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
COL9A1-201ENST00000320755 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
COL9A1-201ENST00000320755 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
COL9A1-201ENST00000320755 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
COL9A1-201ENST00000320755 TMX3Q96JJ7 454 aa21.25■□□□□ 0.99
COL9A1-201ENST00000320755 SALL3Q9BXA9 1300 aa21.25■□□□□ 0.99
COL9A1-201ENST00000320755 ZNF530Q6P9A1 599 aaPredicted RBP21.25■□□□□ 0.99
COL9A1-201ENST00000320755 IP6K1Q92551 441 aa21.25■□□□□ 0.99
COL9A1-201ENST00000320755 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
COL9A1-201ENST00000320755 KLHL40Q2TBA0 621 aa21.25■□□□□ 0.99
COL9A1-201ENST00000320755 MCCP23508 829 aa21.24■□□□□ 0.99
COL9A1-201ENST00000320755 EIF4A1P60842 406 aaKnown RBP21.24■□□□□ 0.99
COL9A1-201ENST00000320755 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
COL9A1-201ENST00000320755 IL25Q9H293 177 aa21.24■□□□□ 0.99
COL9A1-201ENST00000320755 ZDHHC9Q9Y397 364 aa21.24■□□□□ 0.99
COL9A1-201ENST00000320755 BTBD11A6QL63 1104 aa21.23■□□□□ 0.99
COL9A1-201ENST00000320755 OS9Q13438 667 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-201ENST00000320755 LMBRD1Q9NUN5 540 aa21.23■□□□□ 0.99
COL9A1-201ENST00000320755 CYP2E1P05181 493 aaPredicted RBP21.22■□□□□ 0.99
COL9A1-201ENST00000320755 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
COL9A1-201ENST00000320755 CLEC17AQ6ZS10 378 aa21.22■□□□□ 0.99
COL9A1-201ENST00000320755 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
COL9A1-201ENST00000320755 SSH3Q8TE77 659 aa21.21■□□□□ 0.99
COL9A1-201ENST00000320755 RBM27Q9P2N5 1060 aaKnown RBP21.21■□□□□ 0.99
COL9A1-201ENST00000320755 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
COL9A1-201ENST00000320755 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
COL9A1-201ENST00000320755 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
COL9A1-201ENST00000320755 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
COL9A1-201ENST00000320755 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
COL9A1-201ENST00000320755 NASPP49321 788 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms