RNA–Protein interactions for RNA: ENST00000317257.12

SETDB2-202, Transcript of SET domain bifurcated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SETDB2, Length 5,619 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB2-202ENST00000317257 KCNH2Q12809 1159 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 GPS2Q13227 327 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 MAP3K13O43283 966 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 C21orf2O43822 256 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 CLDN10P78369 228 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 OCLNQ16625 522 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 PURBQ96QR8 312 aaKnown RBP4.89□□□□□ -1.63
SETDB2-202ENST00000317257 USP17L5A8MUK1 530 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 CD46P15529 392 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 ANKMY2Q8IV38 441 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 CCDC85AQ96PX6 553 aaPredicted RBP4.89□□□□□ -1.63
SETDB2-202ENST00000317257 SWAP70Q9UH65 585 aa4.89□□□□□ -1.63
SETDB2-202ENST00000317257 HTATSF1O43719 755 aaKnown RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 EVI5O60447 810 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 GAS2L2Q8NHY3 880 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 MRS2Q9HD23 443 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 JADE2Q9NQC1 790 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 PEG3Q9GZU2 1588 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 SKIP12755 728 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 SOX11P35716 441 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 DIXDC1Q155Q3 683 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 GET4Q7L5D6 327 aaPredicted RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 RGL4Q8IZJ4 473 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 RBM33Q96EV2 1170 aaKnown RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 CTDP1Q9Y5B0 961 aaPredicted RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 CFAP99D6REC4 459 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 TPM2P07951 284 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 ARID5AQ03989 594 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 PCGF5Q86SE9 256 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 GTF3C2Q8WUA4 911 aaPredicted RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 GOLGA6L4A6NEF3 574 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 MAP3K7O43318 606 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 NEFHP12036 1026 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 USP8P40818 1118 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 ZNF280DQ6N043 979 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 KIF3CO14782 793 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 RASA1P20936 1047 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 CREBRFQ8IUR6 639 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
SETDB2-202ENST00000317257 CASS4Q9NQ75 786 aa4.88□□□□□ -1.63
SETDB2-202ENST00000317257 RPGRIP1LQ68CZ1 1315 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 PRPF38BQ5VTL8 546 aaKnown RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 CAVIN1Q6NZI2 390 aaKnown RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 USP48Q86UV5 1035 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 PGBD3Q8N328 593 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 VTI1BQ9UEU0 232 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 ZNF76P36508 570 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 DPYDQ12882 1025 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 SOGA3Q5TF21 947 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 TMC4Q7Z404 712 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 C1orf131Q8NDD1 294 aaKnown RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 SYAP1Q96A49 352 aaPredicted RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 CWC15Q9P013 229 aaKnown RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 CXXC1Q9P0U4 656 aaPredicted RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 HCLS1P14317 486 aaPredicted RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 NFE2L2Q16236 605 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 LARP1Q6PKG0 1096 aaKnown RBP4.87□□□□□ -1.63
SETDB2-202ENST00000317257 RNF39Q9H2S5 420 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 KIAA2012Q0VF49 1180 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 APBA2Q99767 749 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 PPP4R2Q9NY27 417 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 EMILIN1Q9Y6C2 1016 aa4.87□□□□□ -1.63
SETDB2-202ENST00000317257 SPDYE1Q8NFV5 336 aaPredicted RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 SRA1Q9HD15 236 aaKnown RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 USP5P45974 858 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 BRDTQ58F21 947 aaPredicted RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 PODNQ7Z5L7 613 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 CHMP4CQ96CF2 233 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 HMGB3O15347 200 aaKnown RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 OATP04181 439 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 TEX35Q5T0J7 233 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 ZSCAN29Q8IWY8 852 aaPredicted RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 TYW1Q9NV66 732 aaKnown RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 IFRD1O00458 451 aaPredicted RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 POU3F3P20264 500 aaPredicted RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 GUCA2AQ02747 115 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 JAMLQ86YT9 394 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 PAGR1Q9BTK6 254 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 PES1O00541 588 aaKnown RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 EIF4G1Q04637 1599 aaKnown RBP4.86□□□□□ -1.63
SETDB2-202ENST00000317257 NCOA4Q13772 614 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 LRRC41Q15345 812 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 DPY19L2Q6NUT2 758 aa4.86□□□□□ -1.63
SETDB2-202ENST00000317257 APPP05067 770 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 GNL2Q13823 731 aaKnown RBP4.85□□□□□ -1.63
SETDB2-202ENST00000317257 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 IPO4Q8TEX9 1081 aaKnown RBP4.85□□□□□ -1.63
SETDB2-202ENST00000317257 MPHOSPH6Q99547 160 aaKnown RBP4.85□□□□□ -1.63
SETDB2-202ENST00000317257 PCDHGC3Q9UN70 934 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 CC2D2AQ9P2K1 1620 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 PHF14O94880 888 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 CTSHP09668 335 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 SKOR2Q2VWA4 1001 aaPredicted RBP4.85□□□□□ -1.63
SETDB2-202ENST00000317257 ENOX1Q8TC92 643 aaKnown RBP4.85□□□□□ -1.63
SETDB2-202ENST00000317257 MKNK1Q9BUB5 465 aa4.85□□□□□ -1.63
SETDB2-202ENST00000317257 GEMIN8Q9NWZ8 242 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms