RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 ITGB4P16144 1822 aa20.09■□□□□ 0.81
HNF4A-202ENST00000316673 KCNQ2O43526 872 aa20.08■□□□□ 0.81
HNF4A-202ENST00000316673 EP400Q96L91 3159 aa20.08■□□□□ 0.8
HNF4A-202ENST00000316673 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
HNF4A-202ENST00000316673 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
HNF4A-202ENST00000316673 PIGBQ92521 554 aa20.06■□□□□ 0.8
HNF4A-202ENST00000316673 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
HNF4A-202ENST00000316673 NEFLP07196 543 aa20.05■□□□□ 0.8
HNF4A-202ENST00000316673 E9PSI1 815 aa20.05■□□□□ 0.8
HNF4A-202ENST00000316673 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
HNF4A-202ENST00000316673 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
HNF4A-202ENST00000316673 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
HNF4A-202ENST00000316673 BABAM1Q9NWV8 329 aa20.05■□□□□ 0.8
HNF4A-202ENST00000316673 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
HNF4A-202ENST00000316673 BTAF1O14981 1849 aa20.04■□□□□ 0.8
HNF4A-202ENST00000316673 APBA3O96018 575 aa20.04■□□□□ 0.8
HNF4A-202ENST00000316673 HMGB2P26583 209 aaKnown RBP20.04■□□□□ 0.8
HNF4A-202ENST00000316673 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
HNF4A-202ENST00000316673 TNS1Q9HBL0 1735 aaKnown RBP20.03■□□□□ 0.8
HNF4A-202ENST00000316673 PLSCR1O15162 318 aa20.03■□□□□ 0.8
HNF4A-202ENST00000316673 BAG6P46379 1132 aa20.03■□□□□ 0.8
HNF4A-202ENST00000316673 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
HNF4A-202ENST00000316673 SIPA1L3O60292 1781 aaPredicted RBP20.02■□□□□ 0.8
HNF4A-202ENST00000316673 SRCAPQ6ZRS2 3230 aa20.01■□□□□ 0.79
HNF4A-202ENST00000316673 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
HNF4A-202ENST00000316673 IL16Q14005 1332 aa20■□□□□ 0.79
HNF4A-202ENST00000316673 PTF1AQ7RTS3 328 aa20■□□□□ 0.79
HNF4A-202ENST00000316673 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
HNF4A-202ENST00000316673 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
HNF4A-202ENST00000316673 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
HNF4A-202ENST00000316673 GNAI1P63096 354 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 PALLDQ8WX93 1383 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 SENP3-EIF4A1A0A087X0R7 540 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 ATG3Q9NT62 314 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
HNF4A-202ENST00000316673 ASAP1Q9ULH1 1129 aa19.98■□□□□ 0.79
HNF4A-202ENST00000316673 SLFN5Q08AF3 891 aa19.97■□□□□ 0.79
HNF4A-202ENST00000316673 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
HNF4A-202ENST00000316673 PAPPAQ13219 1627 aa19.96■□□□□ 0.79
HNF4A-202ENST00000316673 CHL1O00533 1208 aa19.96■□□□□ 0.79
HNF4A-202ENST00000316673 TSPYL4Q9UJ04 414 aa19.96■□□□□ 0.79
HNF4A-202ENST00000316673 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
HNF4A-202ENST00000316673 SLC39A6Q13433 755 aa19.94■□□□□ 0.78
HNF4A-202ENST00000316673 VSIG10Q8N0Z9 540 aa19.94■□□□□ 0.78
HNF4A-202ENST00000316673 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
HNF4A-202ENST00000316673 CAMKK2Q96RR4 588 aa19.94■□□□□ 0.78
HNF4A-202ENST00000316673 LAS1LQ9Y4W2 734 aaKnown RBP19.94■□□□□ 0.78
HNF4A-202ENST00000316673 LY75O60449 1722 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 SIK1P57059 783 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
HNF4A-202ENST00000316673 EN1Q05925 392 aaPredicted RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 CCNL1Q9UK58 526 aaPredicted RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
HNF4A-202ENST00000316673 UBR2Q8IWV8 1755 aa19.92■□□□□ 0.78
HNF4A-202ENST00000316673 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
HNF4A-202ENST00000316673 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
HNF4A-202ENST00000316673 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 TEX13AQ9BXU3 409 aaPredicted RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 MIS18AQ9NYP9 233 aa19.92■□□□□ 0.78
HNF4A-202ENST00000316673 SUPT16HQ9Y5B9 1047 aaKnown RBP19.92■□□□□ 0.78
HNF4A-202ENST00000316673 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
HNF4A-202ENST00000316673 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
HNF4A-202ENST00000316673 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
HNF4A-202ENST00000316673 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
HNF4A-202ENST00000316673 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
HNF4A-202ENST00000316673 MBIPQ9NS73 344 aa19.9■□□□□ 0.78
HNF4A-202ENST00000316673 CT47B1P0C2W7 299 aaPredicted RBP19.89■□□□□ 0.77
HNF4A-202ENST00000316673 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
HNF4A-202ENST00000316673 EZH2Q15910 746 aaKnown RBP19.89■□□□□ 0.77
HNF4A-202ENST00000316673 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
HNF4A-202ENST00000316673 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
HNF4A-202ENST00000316673 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
HNF4A-202ENST00000316673 CICQ96RK0 1608 aaPredicted RBP19.88■□□□□ 0.77
HNF4A-202ENST00000316673 KCNQ3O43525 872 aa19.87■□□□□ 0.77
HNF4A-202ENST00000316673 PROM2Q8N271 834 aa19.87■□□□□ 0.77
HNF4A-202ENST00000316673 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
HNF4A-202ENST00000316673 ERICH6BQ5W0A0 696 aa19.86■□□□□ 0.77
HNF4A-202ENST00000316673 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.86■□□□□ 0.77
HNF4A-202ENST00000316673 RREB1Q92766 1687 aa19.86■□□□□ 0.77
HNF4A-202ENST00000316673 STARD3NLO95772 234 aa19.86■□□□□ 0.77
HNF4A-202ENST00000316673 HOXB7P09629 217 aa19.86■□□□□ 0.77
HNF4A-202ENST00000316673 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
HNF4A-202ENST00000316673 LRRC4BQ9NT99 713 aa19.85■□□□□ 0.77
HNF4A-202ENST00000316673 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
HNF4A-202ENST00000316673 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
HNF4A-202ENST00000316673 NBPF14Q5TI25 921 aa19.83■□□□□ 0.76
HNF4A-202ENST00000316673 TSR2Q969E8 191 aaKnown RBP19.83■□□□□ 0.76
HNF4A-202ENST00000316673 C5P01031 1676 aa19.83■□□□□ 0.76
HNF4A-202ENST00000316673 ITPK1Q13572 414 aa19.82■□□□□ 0.76
HNF4A-202ENST00000316673 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
HNF4A-202ENST00000316673 DNAJC10Q8IXB1 793 aa19.82■□□□□ 0.76
HNF4A-202ENST00000316673 TAF1LQ8IZX4 1826 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms