RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 CARD14Q9BXL6 1004 aa15.27■□□□□ 0.04
SH3PXD2A-201ENST00000315994 SMARCA5O60264 1052 aaPredicted RBP15.27■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ZPR1O75312 459 aa15.27■□□□□ 0.04
SH3PXD2A-201ENST00000315994 NGLY1Q96IV0 654 aa15.27■□□□□ 0.04
SH3PXD2A-201ENST00000315994 KRI1Q8N9T8 703 aaKnown RBP15.27■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.03
SH3PXD2A-201ENST00000315994 MTMR7Q9Y216 660 aa15.27■□□□□ 0.03
SH3PXD2A-201ENST00000315994 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.03
SH3PXD2A-201ENST00000315994 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 TRAK2O60296 914 aa15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IFIT5Q13325 482 aaKnown RBP15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 JAKMIP1Q96N16 626 aaKnown RBP15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 RAI14Q9P0K7 980 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 KCNA6P17658 529 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 SDF4Q9BRK5 362 aa15.25■□□□□ 0.03
SH3PXD2A-201ENST00000315994 A0A087WZG4 1122 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 TRIM22Q8IYM9 498 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 LRP2BPQ9P2M1 347 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PCMTD1Q96MG8 357 aaPredicted RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 STK3Q13188 491 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CCDC43Q96MW1 224 aaKnown RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 KDM4AO75164 1064 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 TDO2P48775 406 aa15.24■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IDH1O75874 414 aaKnown RBP15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 MRE11P49959 708 aa15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 AIDAQ96BJ3 306 aa15.23■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IMMTQ16891 758 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 KINO60870 393 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CDKL5O76039 1030 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 IPO7O95373 1038 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 STK38Q15208 465 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CAVIN1Q6NZI2 390 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CWC25Q9NXE8 425 aaPredicted RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 SAMD9LQ8IVG5 1584 aa15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
SH3PXD2A-201ENST00000315994 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 FIBPO43427 364 aa15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
SH3PXD2A-201ENST00000315994 TOM1O60784 492 aa15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CASTP20810 708 aaKnown RBP15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ARID3AQ99856 593 aa15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 UBAC1Q9BSL1 405 aa15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CHD1O14646 1710 aa15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
SH3PXD2A-201ENST00000315994 SLC5A1P13866 664 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CCDC8Q9H0W5 538 aaPredicted RBP15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ATP2B1P20020 1258 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 TXLNAP40222 546 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 KRT85P78386 507 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 MAP3K5Q99683 1374 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 GCP02774 474 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 HOXC9P31274 260 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PPP1R42Q7Z4L9 355 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 C8orf58Q8NAV2 365 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms