RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TRIM37O94972 964 aa10.53□□□□□ -0.72
CDC42-201ENST00000315554 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
CDC42-201ENST00000315554 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42-201ENST00000315554 ACSBG1Q96GR2 724 aa10.53□□□□□ -0.72
CDC42-201ENST00000315554 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
CDC42-201ENST00000315554 FAM196AQ6ZSG2 479 aa10.52□□□□□ -0.73
CDC42-201ENST00000315554 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
CDC42-201ENST00000315554 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
CDC42-201ENST00000315554 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
CDC42-201ENST00000315554 CYP27B1O15528 508 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 SHANK3Q9BYB0 1731 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 KDRP35968 1356 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 PCDH11XQ9BZA7 1347 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 PCDH11YQ9BZA8 1340 aa10.51□□□□□ -0.73
CDC42-201ENST00000315554 KCNQ2O43526 872 aa10.5□□□□□ -0.73
CDC42-201ENST00000315554 PRKAR2BP31323 418 aa10.5□□□□□ -0.73
CDC42-201ENST00000315554 MMRN1Q13201 1228 aa10.5□□□□□ -0.73
CDC42-201ENST00000315554 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
CDC42-201ENST00000315554 TAOK2Q9UL54 1235 aa10.5□□□□□ -0.73
CDC42-201ENST00000315554 COLQQ9Y215 455 aaPredicted RBP10.5□□□□□ -0.73
CDC42-201ENST00000315554 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
CDC42-201ENST00000315554 IER5LQ5T953 404 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 PKD1L3Q7Z443 1732 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 ST18O60284 1047 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 PHKG2P15735 406 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 DEFB132Q7Z7B7 95 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
CDC42-201ENST00000315554 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 TRPC6Q9Y210 931 aa10.49□□□□□ -0.73
CDC42-201ENST00000315554 SEC24BO95487 1268 aa10.48□□□□□ -0.73
CDC42-201ENST00000315554 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
CDC42-201ENST00000315554 MTHFSDQ2M296 383 aaKnown RBP10.48□□□□□ -0.73
CDC42-201ENST00000315554 IFNL2Q8IZJ0 200 aa10.48□□□□□ -0.73
CDC42-201ENST00000315554 APBA3O96018 575 aa10.47□□□□□ -0.73
CDC42-201ENST00000315554 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
CDC42-201ENST00000315554 AMOTQ4VCS5 1084 aa10.47□□□□□ -0.73
CDC42-201ENST00000315554 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
CDC42-201ENST00000315554 CCDC146Q8IYE0 955 aa10.47□□□□□ -0.73
CDC42-201ENST00000315554 MRS2Q9HD23 443 aa10.47□□□□□ -0.73
CDC42-201ENST00000315554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDC42-201ENST00000315554 TTLL13PA6NNM8 815 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 FCHSD2O94868 740 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.74
CDC42-201ENST00000315554 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.74
CDC42-201ENST00000315554 C1orf141Q5JVX7 400 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 MPRIPQ6WCQ1 1025 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 SPNS2Q8IVW8 549 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 HOMEZQ8IX15 550 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 DOT1LQ8TEK3 1739 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 EP400Q96L91 3159 aa10.46□□□□□ -0.74
CDC42-201ENST00000315554 TNS1Q9HBL0 1735 aaKnown RBP10.45□□□□□ -0.74
CDC42-201ENST00000315554 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
CDC42-201ENST00000315554 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
CDC42-201ENST00000315554 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
CDC42-201ENST00000315554 BCL9O00512 1426 aa10.45□□□□□ -0.74
CDC42-201ENST00000315554 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
CDC42-201ENST00000315554 TOGARAM1Q9Y4F4 1720 aa10.45□□□□□ -0.74
CDC42-201ENST00000315554 BAG6P46379 1132 aa10.44□□□□□ -0.74
CDC42-201ENST00000315554 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
CDC42-201ENST00000315554 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
CDC42-201ENST00000315554 KDM6AO15550 1401 aaPredicted RBP10.44□□□□□ -0.74
CDC42-201ENST00000315554 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
CDC42-201ENST00000315554 MAP3K13O43283 966 aa10.43□□□□□ -0.74
CDC42-201ENST00000315554 EZH2Q15910 746 aaKnown RBP10.43□□□□□ -0.74
CDC42-201ENST00000315554 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
CDC42-201ENST00000315554 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
CDC42-201ENST00000315554 PLEKHF1Q96S99 279 aa10.43□□□□□ -0.74
CDC42-201ENST00000315554 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
CDC42-201ENST00000315554 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
CDC42-201ENST00000315554 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
CDC42-201ENST00000315554 MAPK8IP3Q9UPT6 1336 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 PLEKHG2Q9H7P9 1386 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
CDC42-201ENST00000315554 NEFMP07197 916 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 HSP90AB1P08238 724 aaKnown RBP10.42□□□□□ -0.74
CDC42-201ENST00000315554 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 MIER1Q8N108 512 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 PIGBQ92521 554 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 DCAF5Q96JK2 942 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 TMOD3Q9NYL9 352 aa10.42□□□□□ -0.74
CDC42-201ENST00000315554 BTAF1O14981 1849 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 KCNQ4P56696 695 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 CABP4P57796 275 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 MCM10Q7L590 875 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 PNISRQ8TF01 805 aaKnown RBP10.41□□□□□ -0.74
CDC42-201ENST00000315554 CAMKK2Q96RR4 588 aa10.41□□□□□ -0.74
CDC42-201ENST00000315554 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
CDC42-201ENST00000315554 NFATC2IPQ8NCF5 419 aa10.4□□□□□ -0.74
CDC42-201ENST00000315554 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
CDC42-201ENST00000315554 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
CDC42-201ENST00000315554 ERVV-2B6SEH9 535 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 NFE2L2Q16236 605 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms