RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ATRNO75882 1429 aa31.98■■■□□ 2.71
CDPF1-201ENST00000314567 TEFQ10587 303 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 KRT24Q2M2I5 525 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 GJD4Q96KN9 370 aaPredicted RBP31.97■■■□□ 2.71
CDPF1-201ENST00000314567 TSPYL4Q9UJ04 414 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 ZNF428Q96B54 188 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 DCAF5Q96JK2 942 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 TNS2Q63HR2 1409 aa31.97■■■□□ 2.71
CDPF1-201ENST00000314567 TAF7Q15545 349 aaPredicted RBP31.96■■■□□ 2.71
CDPF1-201ENST00000314567 DDB1Q16531 1140 aa31.96■■■□□ 2.71
CDPF1-201ENST00000314567 QTRT2Q9H974 415 aaKnown RBP31.96■■■□□ 2.71
CDPF1-201ENST00000314567 TRPC5Q9UL62 973 aaPredicted RBP31.96■■■□□ 2.71
CDPF1-201ENST00000314567 A0A0G2JS52 829 aa31.95■■■□□ 2.7
CDPF1-201ENST00000314567 MYT1Q01538 1121 aa31.95■■■□□ 2.7
CDPF1-201ENST00000314567 CDCA7Q9BWT1 371 aaPredicted RBP31.95■■■□□ 2.7
CDPF1-201ENST00000314567 SIPA1L3O60292 1781 aaPredicted RBP31.94■■■□□ 2.7
CDPF1-201ENST00000314567 ELL2O00472 640 aaPredicted RBP31.94■■■□□ 2.7
CDPF1-201ENST00000314567 TSPYL6Q8N831 410 aa31.94■■■□□ 2.7
CDPF1-201ENST00000314567 TSHZ2Q9NRE2 1034 aa31.94■■■□□ 2.7
CDPF1-201ENST00000314567 C8orf58Q8NAV2 365 aa31.93■■■□□ 2.7
CDPF1-201ENST00000314567 NFATC2IPQ8NCF5 419 aa31.93■■■□□ 2.7
CDPF1-201ENST00000314567 TOGARAM1Q9Y4F4 1720 aa31.93■■■□□ 2.7
CDPF1-201ENST00000314567 KCNQ3O43525 872 aa31.92■■■□□ 2.7
CDPF1-201ENST00000314567 HSP90AB1P08238 724 aaKnown RBP31.92■■■□□ 2.7
CDPF1-201ENST00000314567 NKX1-1Q15270 411 aaPredicted RBP31.92■■■□□ 2.7
CDPF1-201ENST00000314567 SLC52A2Q9HAB3 445 aa31.91■■■□□ 2.7
CDPF1-201ENST00000314567 BTBD11A6QL63 1104 aa31.9■■■□□ 2.7
CDPF1-201ENST00000314567 ALDH1L2Q3SY69 923 aa31.9■■■□□ 2.7
CDPF1-201ENST00000314567 FRAT1Q92837 279 aaPredicted RBP31.9■■■□□ 2.7
CDPF1-201ENST00000314567 KAT6BQ8WYB5 2073 aa31.9■■■□□ 2.7
CDPF1-201ENST00000314567 MARCH10Q8NA82 808 aaPredicted RBP31.89■■■□□ 2.7
CDPF1-201ENST00000314567 MS4A1P11836 297 aa31.89■■■□□ 2.69
CDPF1-201ENST00000314567 SMC4Q9NTJ3 1288 aa31.89■■■□□ 2.69
CDPF1-201ENST00000314567 THSD7AQ9UPZ6 1657 aa31.88■■■□□ 2.69
CDPF1-201ENST00000314567 KDM3BQ7LBC6 1761 aa31.88■■■□□ 2.69
CDPF1-201ENST00000314567 SLC39A6Q13433 755 aa31.87■■■□□ 2.69
CDPF1-201ENST00000314567 MRC1P22897 1456 aa31.87■■■□□ 2.69
CDPF1-201ENST00000314567 CABP4P57796 275 aa31.86■■■□□ 2.69
CDPF1-201ENST00000314567 AAMPQ13685 434 aa31.86■■■□□ 2.69
CDPF1-201ENST00000314567 BCL2L13Q9BXK5 485 aa31.86■■■□□ 2.69
CDPF1-201ENST00000314567 ZKSCAN2Q63HK3 967 aa31.86■■■□□ 2.69
CDPF1-201ENST00000314567 SSH1Q8WYL5 1049 aa31.85■■■□□ 2.69
CDPF1-201ENST00000314567 KIF16BQ96L93 1317 aa31.85■■■□□ 2.69
CDPF1-201ENST00000314567 TWISTNBQ3B726 338 aaPredicted RBP31.84■■■□□ 2.69
CDPF1-201ENST00000314567 BRPF1P55201 1214 aaPredicted RBP31.83■■■□□ 2.69
CDPF1-201ENST00000314567 VAMP4O75379 141 aa31.82■■■□□ 2.69
CDPF1-201ENST00000314567 TCERG1O14776 1098 aaKnown RBP31.82■■■□□ 2.68
CDPF1-201ENST00000314567 FAM182BQ5T319 152 aa31.82■■■□□ 2.68
CDPF1-201ENST00000314567 PANK1Q8TE04 598 aa31.82■■■□□ 2.68
CDPF1-201ENST00000314567 ITGB4P16144 1822 aa31.81■■■□□ 2.68
CDPF1-201ENST00000314567 ERVV-2B6SEH9 535 aa31.81■■■□□ 2.68
CDPF1-201ENST00000314567 BABAM1Q9NWV8 329 aa31.81■■■□□ 2.68
CDPF1-201ENST00000314567 DOT1LQ8TEK3 1739 aa31.81■■■□□ 2.68
CDPF1-201ENST00000314567 ZNF772Q68DY9 489 aaPredicted RBP31.8■■■□□ 2.68
CDPF1-201ENST00000314567 SEPT12Q8IYM1 358 aa31.8■■■□□ 2.68
CDPF1-201ENST00000314567 RGS17Q9UGC6 210 aaPredicted RBP31.8■■■□□ 2.68
CDPF1-201ENST00000314567 ACSBG1Q96GR2 724 aa31.79■■■□□ 2.68
CDPF1-201ENST00000314567 ONECUT3O60422 494 aaPredicted RBP31.78■■■□□ 2.68
CDPF1-201ENST00000314567 EIF4A1P60842 406 aaKnown RBP31.78■■■□□ 2.68
CDPF1-201ENST00000314567 COG6Q9Y2V7 657 aa31.78■■■□□ 2.68
CDPF1-201ENST00000314567 SYTL4Q96C24 671 aaPredicted RBP31.78■■■□□ 2.68
CDPF1-201ENST00000314567 IPO8O15397 1037 aaKnown RBP31.77■■■□□ 2.68
CDPF1-201ENST00000314567 ZNF790Q6PG37 636 aa31.77■■■□□ 2.68
CDPF1-201ENST00000314567 CENPQQ7L2Z9 268 aaPredicted RBP31.76■■■□□ 2.68
CDPF1-201ENST00000314567 DZIP1LQ8IYY4 767 aaKnown RBP31.76■■■□□ 2.68
CDPF1-201ENST00000314567 KDM2BQ8NHM5 1336 aa31.76■■■□□ 2.68
CDPF1-201ENST00000314567 PIGBQ92521 554 aa31.76■■■□□ 2.67
CDPF1-201ENST00000314567 TMOD3Q9NYL9 352 aa31.76■■■□□ 2.67
CDPF1-201ENST00000314567 PRIM1P49642 420 aaKnown RBP31.75■■■□□ 2.67
CDPF1-201ENST00000314567 ATF7IPQ6VMQ6 1270 aa31.75■■■□□ 2.67
CDPF1-201ENST00000314567 FTSJ3Q8IY81 847 aaKnown RBP31.75■■■□□ 2.67
CDPF1-201ENST00000314567 CLUAP1Q96AJ1 413 aa31.74■■■□□ 2.67
CDPF1-201ENST00000314567 PRAMEF22A3QJZ6 481 aa31.74■■■□□ 2.67
CDPF1-201ENST00000314567 RLBP1P12271 317 aa31.74■■■□□ 2.67
CDPF1-201ENST00000314567 NECTIN2Q92692 538 aa31.74■■■□□ 2.67
CDPF1-201ENST00000314567 TRIM27P14373 513 aa31.72■■■□□ 2.67
CDPF1-201ENST00000314567 MVPQ14764 893 aaKnown RBP31.72■■■□□ 2.67
CDPF1-201ENST00000314567 ZNF496Q96IT1 587 aaPredicted RBP31.72■■■□□ 2.67
CDPF1-201ENST00000314567 NOB1Q9ULX3 412 aaKnown RBP31.72■■■□□ 2.67
CDPF1-201ENST00000314567 BRWD3Q6RI45 1802 aa31.71■■■□□ 2.67
CDPF1-201ENST00000314567 ILDR1Q86SU0 546 aaPredicted RBP31.71■■■□□ 2.67
CDPF1-201ENST00000314567 TNNQ9UQP3 1299 aa31.71■■■□□ 2.67
CDPF1-201ENST00000314567 RBM6P78332 1123 aaKnown RBP31.7■■■□□ 2.67
CDPF1-201ENST00000314567 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.67
CDPF1-201ENST00000314567 KCNQ2O43526 872 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 POTEAQ6S8J7 498 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 TTC5Q8N0Z6 440 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 PAPPAQ13219 1627 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 ARHGAP45Q92619 1136 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 BCL9O00512 1426 aa31.69■■■□□ 2.66
CDPF1-201ENST00000314567 EP400Q96L91 3159 aa31.68■■■□□ 2.66
CDPF1-201ENST00000314567 MRPL50Q8N5N7 158 aaKnown RBP31.68■■■□□ 2.66
CDPF1-201ENST00000314567 PTF1AQ7RTS3 328 aa31.67■■■□□ 2.66
CDPF1-201ENST00000314567 C5P01031 1676 aa31.67■■■□□ 2.66
CDPF1-201ENST00000314567 HEG1Q9ULI3 1381 aa31.67■■■□□ 2.66
CDPF1-201ENST00000314567 PTCD1O75127 700 aaKnown RBP31.66■■■□□ 2.66
CDPF1-201ENST00000314567 GIGYF1O75420 1035 aaPredicted RBP31.66■■■□□ 2.66
CDPF1-201ENST00000314567 EIF2S2P20042 333 aaKnown RBP31.66■■■□□ 2.66
CDPF1-201ENST00000314567 ATG3Q9NT62 314 aa31.65■■■□□ 2.66
CDPF1-201ENST00000314567 UBR2Q8IWV8 1755 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms