RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MX1P20591 662 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 CHMLP26374 656 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 DMTNQ08495 405 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 CCDC183Q5T5S1 534 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 ABCC3O15438 1527 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
COL6A2-202ENST00000310645 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 NCKAP5LQ9HCH0 1330 aa17.71■□□□□ 0.43
COL6A2-202ENST00000310645 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 COG3Q96JB2 828 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
COL6A2-202ENST00000310645 RAPGEF3O95398 923 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 UVSSAQ2YD98 709 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
COL6A2-202ENST00000310645 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
COL6A2-202ENST00000310645 ARHGEF40Q8TER5 1519 aa17.69■□□□□ 0.42
COL6A2-202ENST00000310645 TCHHQ07283 1943 aa17.69■□□□□ 0.42
COL6A2-202ENST00000310645 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
COL6A2-202ENST00000310645 PDCL2Q8N4E4 241 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 IL25Q9H293 177 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 ABCA9Q8IUA7 1624 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 KDM4AO75164 1064 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 GNAI2P04899 355 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
COL6A2-202ENST00000310645 PYCARDQ9ULZ3 195 aa17.68■□□□□ 0.42
COL6A2-202ENST00000310645 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
COL6A2-202ENST00000310645 RGS12O14924 1447 aa17.67■□□□□ 0.42
COL6A2-202ENST00000310645 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
COL6A2-202ENST00000310645 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
COL6A2-202ENST00000310645 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-202ENST00000310645 PTPRMP28827 1452 aa17.67■□□□□ 0.42
COL6A2-202ENST00000310645 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
COL6A2-202ENST00000310645 PTPRCP08575 1304 aa17.66■□□□□ 0.42
COL6A2-202ENST00000310645 CHL1O00533 1208 aa17.66■□□□□ 0.42
COL6A2-202ENST00000310645 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
COL6A2-202ENST00000310645 CPA1P15085 419 aa17.66■□□□□ 0.42
COL6A2-202ENST00000310645 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL6A2-202ENST00000310645 ANAPC15P60006 121 aa17.65■□□□□ 0.42
COL6A2-202ENST00000310645 POGZQ7Z3K3 1410 aa17.65■□□□□ 0.42
COL6A2-202ENST00000310645 ZSCAN22P10073 491 aaPredicted RBP17.65■□□□□ 0.42
COL6A2-202ENST00000310645 AP5Z1O43299 807 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 SYT1P21579 422 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
COL6A2-202ENST00000310645 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 STX6O43752 255 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 UBE2HP62256 183 aa17.64■□□□□ 0.41
COL6A2-202ENST00000310645 UTP14CQ5TAP6 766 aaKnown RBP17.63■□□□□ 0.41
COL6A2-202ENST00000310645 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 YEATS2Q9ULM3 1422 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 GTF2F1P35269 517 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL6A2-202ENST00000310645 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
COL6A2-202ENST00000310645 FOXO3O43524 673 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 KCNF1Q9H3M0 494 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
COL6A2-202ENST00000310645 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
COL6A2-202ENST00000310645 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
COL6A2-202ENST00000310645 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
COL6A2-202ENST00000310645 SPTLC3Q9NUV7 552 aa17.62■□□□□ 0.41
COL6A2-202ENST00000310645 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
COL6A2-202ENST00000310645 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
COL6A2-202ENST00000310645 AK2P54819 239 aa17.62■□□□□ 0.41
COL6A2-202ENST00000310645 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
COL6A2-202ENST00000310645 KIAA1524Q8TCG1 905 aa17.62■□□□□ 0.41
COL6A2-202ENST00000310645 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
COL6A2-202ENST00000310645 DRC7Q8IY82 874 aa17.61■□□□□ 0.41
COL6A2-202ENST00000310645 RPAP1Q9BWH6 1393 aaPredicted RBP17.61■□□□□ 0.41
COL6A2-202ENST00000310645 NUTM2FA1L443 756 aa17.61■□□□□ 0.41
COL6A2-202ENST00000310645 CAMK4Q16566 473 aa17.61■□□□□ 0.41
COL6A2-202ENST00000310645 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
COL6A2-202ENST00000310645 F13A1P00488 732 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL6A2-202ENST00000310645 PTGS1P23219 599 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 RASEFQ8IZ41 740 aa17.6■□□□□ 0.41
COL6A2-202ENST00000310645 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
COL6A2-202ENST00000310645 HSPA4P34932 840 aa17.59■□□□□ 0.41
COL6A2-202ENST00000310645 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
COL6A2-202ENST00000310645 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
COL6A2-202ENST00000310645 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.41
COL6A2-202ENST00000310645 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.41
COL6A2-202ENST00000310645 RUFY3Q7L099 469 aa17.58■□□□□ 0.41
COL6A2-202ENST00000310645 C16orf45Q96MC5 204 aaPredicted RBP17.58■□□□□ 0.41
COL6A2-202ENST00000310645 GTPBP4Q9BZE4 634 aaKnown RBP17.58■□□□□ 0.41
COL6A2-202ENST00000310645 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.41
COL6A2-202ENST00000310645 KIF20BQ96Q89 1820 aa17.58■□□□□ 0.4
COL6A2-202ENST00000310645 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
COL6A2-202ENST00000310645 LARGE1O95461 756 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms