RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
TRIM59-201ENST00000309784 F6X3S4 739 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 PCDH11XQ9BZA7 1347 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 PCDH11YQ9BZA8 1340 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
TRIM59-201ENST00000309784 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 CHMP4AQ9BY43 222 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 MEGF6O75095 1541 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
TRIM59-201ENST00000309784 AIMP1Q12904 312 aaKnown RBP14.06□□□□□ -0.16
TRIM59-201ENST00000309784 CENPQQ7L2Z9 268 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-201ENST00000309784 RWDD1Q9H446 243 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-201ENST00000309784 PHRF1Q9P1Y6 1649 aaKnown RBP14.05□□□□□ -0.16
TRIM59-201ENST00000309784 CAMTA1Q9Y6Y1 1673 aa14.05□□□□□ -0.16
TRIM59-201ENST00000309784 EXOC5O00471 708 aa14.05□□□□□ -0.16
TRIM59-201ENST00000309784 PTCD1O75127 700 aaKnown RBP14.05□□□□□ -0.16
TRIM59-201ENST00000309784 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
TRIM59-201ENST00000309784 G2E3Q7L622 706 aa14.05□□□□□ -0.16
TRIM59-201ENST00000309784 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
TRIM59-201ENST00000309784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRIM59-201ENST00000309784 EIF4A1P60842 406 aaKnown RBP14.04□□□□□ -0.16
TRIM59-201ENST00000309784 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-201ENST00000309784 FLIIQ13045 1269 aa14.04□□□□□ -0.16
TRIM59-201ENST00000309784 MYL6BP14649 208 aa14.03□□□□□ -0.16
TRIM59-201ENST00000309784 CHPF2Q9P2E5 772 aa14.03□□□□□ -0.16
TRIM59-201ENST00000309784 ZNF790Q6PG37 636 aa14.03□□□□□ -0.16
TRIM59-201ENST00000309784 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
TRIM59-201ENST00000309784 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.16
TRIM59-201ENST00000309784 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.16
TRIM59-201ENST00000309784 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
TRIM59-201ENST00000309784 PCDHB15Q9Y5E8 787 aa14.02□□□□□ -0.17
TRIM59-201ENST00000309784 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
TRIM59-201ENST00000309784 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
TRIM59-201ENST00000309784 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
TRIM59-201ENST00000309784 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
TRIM59-201ENST00000309784 IGHDP01880 384 aa14.01□□□□□ -0.17
TRIM59-201ENST00000309784 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
TRIM59-201ENST00000309784 PTPRCP08575 1304 aa14□□□□□ -0.17
TRIM59-201ENST00000309784 APBB1O00213 710 aa14□□□□□ -0.17
TRIM59-201ENST00000309784 DDB1Q16531 1140 aa14□□□□□ -0.17
TRIM59-201ENST00000309784 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
TRIM59-201ENST00000309784 FMNL2Q96PY5 1086 aa14□□□□□ -0.17
TRIM59-201ENST00000309784 NCAPD2Q15021 1401 aa14□□□□□ -0.17
TRIM59-201ENST00000309784 AAMPQ13685 434 aa13.99□□□□□ -0.17
TRIM59-201ENST00000309784 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
TRIM59-201ENST00000309784 NHSL1Q5SYE7 1610 aa13.99□□□□□ -0.17
TRIM59-201ENST00000309784 PHLPP1O60346 1717 aa13.99□□□□□ -0.17
TRIM59-201ENST00000309784 GIGYF1O75420 1035 aaPredicted RBP13.98□□□□□ -0.17
TRIM59-201ENST00000309784 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
TRIM59-201ENST00000309784 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
TRIM59-201ENST00000309784 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
TRIM59-201ENST00000309784 HSPA1LP34931 641 aa13.98□□□□□ -0.17
TRIM59-201ENST00000309784 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
TRIM59-201ENST00000309784 BRPF1P55201 1214 aaPredicted RBP13.97□□□□□ -0.17
TRIM59-201ENST00000309784 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
TRIM59-201ENST00000309784 JCADQ9P266 1359 aa13.97□□□□□ -0.17
TRIM59-201ENST00000309784 PI4KAP2A4QPH2 592 aa13.97□□□□□ -0.17
TRIM59-201ENST00000309784 CCT4P50991 539 aaKnown RBP13.97□□□□□ -0.17
TRIM59-201ENST00000309784 PI4KAP1Q8N8J0 262 aa13.97□□□□□ -0.17
TRIM59-201ENST00000309784 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
TRIM59-201ENST00000309784 DDX58O95786 925 aaKnown RBP13.96□□□□□ -0.17
TRIM59-201ENST00000309784 USP21Q9UK80 565 aa13.96□□□□□ -0.17
TRIM59-201ENST00000309784 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.18
TRIM59-201ENST00000309784 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-201ENST00000309784 MEIS3Q99687 375 aa13.95□□□□□ -0.18
TRIM59-201ENST00000309784 ABCC4O15439 1325 aa13.95□□□□□ -0.18
TRIM59-201ENST00000309784 HOXB7P09629 217 aa13.95□□□□□ -0.18
TRIM59-201ENST00000309784 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
TRIM59-201ENST00000309784 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-201ENST00000309784 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
TRIM59-201ENST00000309784 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-201ENST00000309784 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-201ENST00000309784 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
TRIM59-201ENST00000309784 PROSER3Q2NL68 480 aa13.94□□□□□ -0.18
TRIM59-201ENST00000309784 UNC5CLQ8IV45 518 aa13.94□□□□□ -0.18
TRIM59-201ENST00000309784 C9orf78Q9NZ63 289 aaPredicted RBP13.94□□□□□ -0.18
TRIM59-201ENST00000309784 DNAAF4Q8WXU2 420 aa13.94□□□□□ -0.18
TRIM59-201ENST00000309784 COL18A1P39060 1754 aa13.94□□□□□ -0.18
TRIM59-201ENST00000309784 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
TRIM59-201ENST00000309784 HYPKQ9NX55 129 aa13.93□□□□□ -0.18
TRIM59-201ENST00000309784 UBTFL1P0CB47 393 aaPredicted RBP13.93□□□□□ -0.18
TRIM59-201ENST00000309784 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
TRIM59-201ENST00000309784 NEXNQ0ZGT2 675 aa13.93□□□□□ -0.18
TRIM59-201ENST00000309784 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
TRIM59-201ENST00000309784 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
TRIM59-201ENST00000309784 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
TRIM59-201ENST00000309784 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
TRIM59-201ENST00000309784 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 KDM2BQ8NHM5 1336 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 COPS6Q7L5N1 327 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 XAGE3Q8WTP9 111 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 ASAP1Q9ULH1 1129 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 ABCC6O95255 1503 aa13.92□□□□□ -0.18
TRIM59-201ENST00000309784 GNAI3P08754 354 aa13.91□□□□□ -0.18
TRIM59-201ENST00000309784 DDX21Q9NR30 783 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM59-201ENST00000309784 HMMRO75330 724 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms