RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 KRT28Q7Z3Y7 464 aa24.37■■□□□ 1.49
SH3RF3-201ENST00000309415 DNAI2Q9GZS0 605 aa24.37■■□□□ 1.49
SH3RF3-201ENST00000309415 RAB11FIP3O75154 756 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 NME9Q86XW9 330 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 MAP3K12Q12852 859 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 NFKBIBQ15653 356 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 CFAP45Q9UL16 551 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 ANKRD18BA2A2Z9 1011 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 SPATA32Q96LK8 384 aa24.36■■□□□ 1.49
SH3RF3-201ENST00000309415 K7ELQ4 463 aaPredicted RBP24.35■■□□□ 1.49
SH3RF3-201ENST00000309415 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
SH3RF3-201ENST00000309415 CCDC181Q5TID7 509 aa24.35■■□□□ 1.49
SH3RF3-201ENST00000309415 U3KPZ7 1027 aaPredicted RBP24.35■■□□□ 1.49
SH3RF3-201ENST00000309415 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
SH3RF3-201ENST00000309415 CBFA2T2O43439 604 aa24.34■■□□□ 1.49
SH3RF3-201ENST00000309415 CCDC96Q2M329 555 aa24.34■■□□□ 1.49
SH3RF3-201ENST00000309415 NAPBQ9H115 298 aa24.34■■□□□ 1.49
SH3RF3-201ENST00000309415 ZNF444Q8N0Y2 327 aaPredicted RBP24.34■■□□□ 1.49
SH3RF3-201ENST00000309415 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
SH3RF3-201ENST00000309415 C6orf229H3BNL8 230 aa24.33■■□□□ 1.49
SH3RF3-201ENST00000309415 EXOC6BQ9Y2D4 811 aa24.33■■□□□ 1.49
SH3RF3-201ENST00000309415 CUL5Q93034 780 aa24.33■■□□□ 1.49
SH3RF3-201ENST00000309415 THUMPD2Q9BTF0 503 aaKnown RBP24.33■■□□□ 1.49
SH3RF3-201ENST00000309415 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
SH3RF3-201ENST00000309415 MYCNP04198 464 aaPredicted RBP24.32■■□□□ 1.48
SH3RF3-201ENST00000309415 ZRSR2Q15696 482 aaKnown RBP24.32■■□□□ 1.48
SH3RF3-201ENST00000309415 SEPT7Q16181 437 aaKnown RBP24.32■■□□□ 1.48
SH3RF3-201ENST00000309415 FBXO31Q5XUX0 539 aaPredicted RBP24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 SPC24Q8NBT2 197 aa24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 HYPKQ9NX55 129 aa24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 TEX13AQ9BXU3 409 aaPredicted RBP24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 AKNAQ7Z591 1439 aa24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 GLRX3O76003 335 aaKnown RBP24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 PPP1R12BO60237 982 aaPredicted RBP24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 CASTP20810 708 aaKnown RBP24.31■■□□□ 1.48
SH3RF3-201ENST00000309415 TMEM57Q8N5G2 664 aa24.3■■□□□ 1.48
SH3RF3-201ENST00000309415 POTEJP0CG39 1038 aa24.3■■□□□ 1.48
SH3RF3-201ENST00000309415 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 CTCFLQ8NI51 663 aaPredicted RBP24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 GPTP24298 496 aa24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 BOLA2Q9H3K6 86 aa24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 EHMT1Q9H9B1 1298 aa24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 ANKRD62A6NC57 917 aa24.29■■□□□ 1.48
SH3RF3-201ENST00000309415 RANBP6O60518 1105 aaKnown RBP24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 MX1P20591 662 aa24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 DDX11Q96FC9 970 aa24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 RFC4P35249 363 aa24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 CCDC196A0A1B0GTZ2 297 aa24.28■■□□□ 1.48
SH3RF3-201ENST00000309415 DDX46Q7L014 1031 aaKnown RBP24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 ZNF622Q969S3 477 aaKnown RBP eCLIP24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 IQGAP2Q13576 1575 aa24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 IQCA1Q86XH1 822 aa24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 A0A087WZG4 1122 aa24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
SH3RF3-201ENST00000309415 SSR1P43307 286 aaKnown RBP24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 GOLGA6L10A6NI86 522 aa24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 CDC5LQ99459 802 aaKnown RBP24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 KIF14Q15058 1648 aa24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 DBF4Q9UBU7 674 aaPredicted RBP24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 EMILIN1Q9Y6C2 1016 aa24.26■■□□□ 1.47
SH3RF3-201ENST00000309415 EIF5P55010 431 aaKnown RBP24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 TMEM87AQ8NBN3 555 aa24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 ST5P78524 1137 aa24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 AXDND1Q5T1B0 1012 aaPredicted RBP24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 PDIA4P13667 645 aaKnown RBP24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 PPP1R42Q7Z4L9 355 aa24.25■■□□□ 1.47
SH3RF3-201ENST00000309415 FEZ1Q99689 392 aa24.24■■□□□ 1.47
SH3RF3-201ENST00000309415 RNF41Q9H4P4 317 aaPredicted RBP24.24■■□□□ 1.47
SH3RF3-201ENST00000309415 CCDC191Q8NCU4 936 aa24.23■■□□□ 1.47
SH3RF3-201ENST00000309415 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
SH3RF3-201ENST00000309415 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
SH3RF3-201ENST00000309415 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
SH3RF3-201ENST00000309415 DENND4BO75064 1496 aaPredicted RBP24.23■■□□□ 1.47
SH3RF3-201ENST00000309415 SPDYE4A6NLX3 237 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 LDHCP07864 332 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 ALDH1L2Q3SY69 923 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 MAP7D2Q96T17 732 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 NUP62CLQ9H1M0 184 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 SMTNL1A8MU46 457 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 MSH6P52701 1360 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 ABCC11Q96J66 1382 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 ZNF213O14771 459 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 RAB34Q9BZG1 259 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 UPF3BQ9BZI7 483 aaKnown RBP24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 SLC12A7Q9Y666 1083 aa24.22■■□□□ 1.47
SH3RF3-201ENST00000309415 NAIPQ13075 1403 aa24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 CCDC8Q9H0W5 538 aaPredicted RBP24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 TOM1O60784 492 aa24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 TMEM266Q2M3C6 531 aa24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 TSG101Q99816 390 aa24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 TTC21BQ7Z4L5 1316 aa24.21■■□□□ 1.47
SH3RF3-201ENST00000309415 SMARCA5O60264 1052 aaPredicted RBP24.2■■□□□ 1.47
SH3RF3-201ENST00000309415 IDI1Q13907 227 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms