RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 GNPATO15228 680 aa16.74■□□□□ 0.27
SMIM4-201ENST00000307106 SIK1P57059 783 aa16.74■□□□□ 0.27
SMIM4-201ENST00000307106 FSTL1Q12841 308 aa16.74■□□□□ 0.27
SMIM4-201ENST00000307106 PIGBQ92521 554 aa16.74■□□□□ 0.27
SMIM4-201ENST00000307106 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
SMIM4-201ENST00000307106 KCPQ6ZWJ8 1503 aa16.74■□□□□ 0.27
SMIM4-201ENST00000307106 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
SMIM4-201ENST00000307106 FCHSD2O94868 740 aa16.72■□□□□ 0.27
SMIM4-201ENST00000307106 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
SMIM4-201ENST00000307106 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
SMIM4-201ENST00000307106 INSRP06213 1382 aa16.71■□□□□ 0.27
SMIM4-201ENST00000307106 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
SMIM4-201ENST00000307106 DPEP1P16444 411 aa16.7■□□□□ 0.26
SMIM4-201ENST00000307106 ITPK1Q13572 414 aa16.7■□□□□ 0.26
SMIM4-201ENST00000307106 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
SMIM4-201ENST00000307106 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SMIM4-201ENST00000307106 ATP6V1AP38606 617 aa16.69■□□□□ 0.26
SMIM4-201ENST00000307106 CCDC87Q9NVE4 849 aa16.69■□□□□ 0.26
SMIM4-201ENST00000307106 ANKRD26Q9UPS8 1709 aa16.68■□□□□ 0.26
SMIM4-201ENST00000307106 FLT4P35916 1363 aa16.68■□□□□ 0.26
SMIM4-201ENST00000307106 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
SMIM4-201ENST00000307106 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
SMIM4-201ENST00000307106 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
SMIM4-201ENST00000307106 TMF1P82094 1093 aa16.67■□□□□ 0.26
SMIM4-201ENST00000307106 GGNBP2Q9H3C7 697 aa16.67■□□□□ 0.26
SMIM4-201ENST00000307106 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
SMIM4-201ENST00000307106 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
SMIM4-201ENST00000307106 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
SMIM4-201ENST00000307106 FYB1O15117 783 aa16.66■□□□□ 0.26
SMIM4-201ENST00000307106 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
SMIM4-201ENST00000307106 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
SMIM4-201ENST00000307106 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
SMIM4-201ENST00000307106 NCAPD2Q15021 1401 aa16.65■□□□□ 0.26
SMIM4-201ENST00000307106 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
SMIM4-201ENST00000307106 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
SMIM4-201ENST00000307106 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
SMIM4-201ENST00000307106 HSPA1AP0DMV8 641 aaKnown RBP16.64■□□□□ 0.25
SMIM4-201ENST00000307106 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
SMIM4-201ENST00000307106 KCNA3P22001 575 aa16.64■□□□□ 0.25
SMIM4-201ENST00000307106 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
SMIM4-201ENST00000307106 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
SMIM4-201ENST00000307106 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
SMIM4-201ENST00000307106 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
SMIM4-201ENST00000307106 KDRP35968 1356 aa16.63■□□□□ 0.25
SMIM4-201ENST00000307106 DLEC1Q9Y238 1755 aa16.62■□□□□ 0.25
SMIM4-201ENST00000307106 AFDNP55196 1824 aaKnown RBP16.62■□□□□ 0.25
SMIM4-201ENST00000307106 GYS1P13807 737 aa16.62■□□□□ 0.25
SMIM4-201ENST00000307106 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
SMIM4-201ENST00000307106 TESK2Q96S53 571 aa16.62■□□□□ 0.25
SMIM4-201ENST00000307106 ADRA2BP18089 450 aa16.61■□□□□ 0.25
SMIM4-201ENST00000307106 RFC4P35249 363 aa16.61■□□□□ 0.25
SMIM4-201ENST00000307106 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
SMIM4-201ENST00000307106 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
SMIM4-201ENST00000307106 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
SMIM4-201ENST00000307106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMIM4-201ENST00000307106 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
SMIM4-201ENST00000307106 PHKG2P15735 406 aa16.58■□□□□ 0.24
SMIM4-201ENST00000307106 RC3H1Q5TC82 1133 aaKnown RBP16.58■□□□□ 0.24
SMIM4-201ENST00000307106 SLC4A9Q96Q91 983 aa16.58■□□□□ 0.24
SMIM4-201ENST00000307106 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
SMIM4-201ENST00000307106 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
SMIM4-201ENST00000307106 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.24
SMIM4-201ENST00000307106 TJP1Q07157 1748 aa16.57■□□□□ 0.24
SMIM4-201ENST00000307106 TONSLQ96HA7 1378 aa16.57■□□□□ 0.24
SMIM4-201ENST00000307106 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
SMIM4-201ENST00000307106 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
SMIM4-201ENST00000307106 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
SMIM4-201ENST00000307106 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
SMIM4-201ENST00000307106 VIRMAQ69YN4 1812 aaKnown RBP16.55■□□□□ 0.24
SMIM4-201ENST00000307106 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
SMIM4-201ENST00000307106 CHRNA5P30532 468 aa16.55■□□□□ 0.24
SMIM4-201ENST00000307106 KDM6AO15550 1401 aaPredicted RBP16.54■□□□□ 0.24
SMIM4-201ENST00000307106 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
SMIM4-201ENST00000307106 EYA1Q99502 592 aa16.54■□□□□ 0.24
SMIM4-201ENST00000307106 NRXN2Q9P2S2 1712 aa16.53■□□□□ 0.24
SMIM4-201ENST00000307106 RASSF7Q02833 373 aa16.53■□□□□ 0.24
SMIM4-201ENST00000307106 DDR1Q08345 913 aa16.53■□□□□ 0.24
SMIM4-201ENST00000307106 GLTPD2A6NH11 291 aa16.52■□□□□ 0.24
SMIM4-201ENST00000307106 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SMIM4-201ENST00000307106 SRP68Q9UHB9 627 aaKnown RBP16.52■□□□□ 0.24
SMIM4-201ENST00000307106 CACNA1SQ13698 1873 aa16.52■□□□□ 0.23
SMIM4-201ENST00000307106 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
SMIM4-201ENST00000307106 USP42Q9H9J4 1324 aaKnown RBP16.51■□□□□ 0.23
SMIM4-201ENST00000307106 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
SMIM4-201ENST00000307106 SLC34A2O95436 690 aa16.51■□□□□ 0.23
SMIM4-201ENST00000307106 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
SMIM4-201ENST00000307106 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
SMIM4-201ENST00000307106 LMNB1P20700 586 aa16.5■□□□□ 0.23
SMIM4-201ENST00000307106 POLRMTO00411 1230 aaKnown RBP16.48■□□□□ 0.23
SMIM4-201ENST00000307106 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
SMIM4-201ENST00000307106 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
SMIM4-201ENST00000307106 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.23
SMIM4-201ENST00000307106 PTCD1O75127 700 aaKnown RBP16.46■□□□□ 0.23
SMIM4-201ENST00000307106 TM4SF1P30408 202 aa16.46■□□□□ 0.23
SMIM4-201ENST00000307106 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
SMIM4-201ENST00000307106 POTECB2RU33 542 aa16.45■□□□□ 0.22
SMIM4-201ENST00000307106 CABP4P57796 275 aa16.45■□□□□ 0.22
SMIM4-201ENST00000307106 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
SMIM4-201ENST00000307106 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
SMIM4-201ENST00000307106 FOXN1O15353 648 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms