RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MVPQ14764 893 aaKnown RBP14.78□□□□□ -0.04
USP38-201ENST00000307017 PAIP2Q9BPZ3 127 aaKnown RBP14.78□□□□□ -0.04
USP38-201ENST00000307017 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
USP38-201ENST00000307017 CRACR2AQ9BSW2 395 aa14.77□□□□□ -0.04
USP38-201ENST00000307017 CCDC57Q2TAC2 916 aa14.77□□□□□ -0.04
USP38-201ENST00000307017 MPHOSPH8Q99549 860 aa14.77□□□□□ -0.04
USP38-201ENST00000307017 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
USP38-201ENST00000307017 CDK19Q9BWU1 502 aa14.77□□□□□ -0.05
USP38-201ENST00000307017 ZMYND15Q9H091 742 aa14.77□□□□□ -0.05
USP38-201ENST00000307017 GNAI3P08754 354 aa14.77□□□□□ -0.05
USP38-201ENST00000307017 GOLGA6L7A0A1B0GV03 622 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 TAF4BQ92750 862 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 UBAC1Q9BSL1 405 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 RRP9O43818 475 aaKnown RBP14.76□□□□□ -0.05
USP38-201ENST00000307017 HAND2P61296 217 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 TOM1L2Q6ZVM7 507 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.76□□□□□ -0.05
USP38-201ENST00000307017 PTCD1O75127 700 aaKnown RBP14.76□□□□□ -0.05
USP38-201ENST00000307017 PDCP20941 246 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 USP8P40818 1118 aa14.76□□□□□ -0.05
USP38-201ENST00000307017 TNPO1Q92973 898 aaKnown RBP14.76□□□□□ -0.05
USP38-201ENST00000307017 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 LRRC2Q9BYS8 371 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 ADCY5O95622 1261 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 RGS22Q8NE09 1264 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 GCC1Q96CN9 775 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 FAM160A1Q05DH4 1040 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 CEP63Q96MT8 703 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.75□□□□□ -0.05
USP38-201ENST00000307017 GSTTP1A0A1W2PQM5 241 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 GIMAP6Q6P9H5 292 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
USP38-201ENST00000307017 HLTFQ14527 1009 aaKnown RBP eCLIP14.75□□□□□ -0.05
USP38-201ENST00000307017 TDRD12Q587J7 1177 aaKnown RBP14.74□□□□□ -0.05
USP38-201ENST00000307017 APBB1IPQ7Z5R6 666 aaPredicted RBP14.74□□□□□ -0.05
USP38-201ENST00000307017 DNAJC21Q5F1R6 531 aaKnown RBP14.74□□□□□ -0.05
USP38-201ENST00000307017 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 SHTN1A0MZ66 631 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 GPIHBP1Q8IV16 184 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 ATF7IPQ6VMQ6 1270 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 MAATS1Q7Z4T9 603 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 RABEP2Q9H5N1 569 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 SMIM23A6NLE4 172 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
USP38-201ENST00000307017 ANAPC15P60006 121 aa14.73□□□□□ -0.05
USP38-201ENST00000307017 LUZP1Q86V48 1076 aa14.73□□□□□ -0.05
USP38-201ENST00000307017 ZC3H6P61129 1189 aaKnown RBP14.73□□□□□ -0.05
USP38-201ENST00000307017 FKBP15Q5T1M5 1219 aa14.73□□□□□ -0.05
USP38-201ENST00000307017 TOP1P11387 765 aaKnown RBP14.73□□□□□ -0.05
USP38-201ENST00000307017 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
USP38-201ENST00000307017 SCLT1Q96NL6 688 aa14.73□□□□□ -0.05
USP38-201ENST00000307017 MYD88Q99836 296 aa14.73□□□□□ -0.05
USP38-201ENST00000307017 FBLN1P23142 703 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 ZSCAN30Q86W11 494 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 MYO1BO43795 1136 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 SMC1AQ14683 1233 aaKnown RBP14.72□□□□□ -0.05
USP38-201ENST00000307017 TCEANC2Q96MN5 208 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 RANBP6O60518 1105 aaKnown RBP14.72□□□□□ -0.05
USP38-201ENST00000307017 NECAB1Q8N987 351 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 ANKRD18AQ8IVF6 992 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 JMYQ8N9B5 988 aa14.72□□□□□ -0.05
USP38-201ENST00000307017 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
USP38-201ENST00000307017 TMEM110-MUSTN1A8MSY1 372 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 SPA17Q15506 151 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 CTR9Q6PD62 1173 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 PUF60Q9UHX1 559 aaKnown RBP14.71□□□□□ -0.05
USP38-201ENST00000307017 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
USP38-201ENST00000307017 PTGS1P23219 599 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 JAKMIP3Q5VZ66 844 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 SRCIN1Q9C0H9 1055 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 HIP1O00291 1037 aa14.71□□□□□ -0.05
USP38-201ENST00000307017 KIF5CO60282 957 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 GJB2P29033 226 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 AIDAQ96BJ3 306 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 SFPQP23246 707 aaKnown RBP eCLIP14.7□□□□□ -0.06
USP38-201ENST00000307017 GJC1P36383 396 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 SNRKQ9NRH2 765 aa14.7□□□□□ -0.06
USP38-201ENST00000307017 EZRP15311 586 aaKnown RBP14.7□□□□□ -0.06
USP38-201ENST00000307017 ZNF397Q8NF99 534 aaPredicted RBP14.7□□□□□ -0.06
USP38-201ENST00000307017 MCM2P49736 904 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 ANKRD1Q15327 319 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
USP38-201ENST00000307017 NACAP1Q9BZK3 213 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 PAXIP1Q6ZW49 1069 aaPredicted RBP14.69□□□□□ -0.06
USP38-201ENST00000307017 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 JADE2Q9NQC1 790 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 NOP2P46087 812 aaKnown RBP14.69□□□□□ -0.06
USP38-201ENST00000307017 METTL24Q5JXM2 366 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
USP38-201ENST00000307017 SPECC1Q5M775 1068 aa14.69□□□□□ -0.06
USP38-201ENST00000307017 PIP4K2AP48426 406 aaPredicted RBP14.69□□□□□ -0.06
USP38-201ENST00000307017 SMTNL1A8MU46 457 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 CAPZA3Q96KX2 299 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
USP38-201ENST00000307017 CCDC183Q5T5S1 534 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms