RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 HOXC9P31274 260 aa18.58■□□□□ 0.56
CSDC2-201ENST00000306149 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.56
CSDC2-201ENST00000306149 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
CSDC2-201ENST00000306149 ERC2O15083 957 aa18.58■□□□□ 0.56
CSDC2-201ENST00000306149 MCTP1Q6DN14 999 aa18.58■□□□□ 0.56
CSDC2-201ENST00000306149 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
CSDC2-201ENST00000306149 CHAMP1Q96JM3 812 aa18.57■□□□□ 0.56
CSDC2-201ENST00000306149 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
CSDC2-201ENST00000306149 REC8O95072 547 aa18.57■□□□□ 0.56
CSDC2-201ENST00000306149 KCNA6P17658 529 aa18.57■□□□□ 0.56
CSDC2-201ENST00000306149 CCDC30Q5VVM6 783 aa18.57■□□□□ 0.56
CSDC2-201ENST00000306149 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
CSDC2-201ENST00000306149 GOLGA6L22H0YM25 854 aa18.56■□□□□ 0.56
CSDC2-201ENST00000306149 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
CSDC2-201ENST00000306149 ST18O60284 1047 aa18.55■□□□□ 0.56
CSDC2-201ENST00000306149 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
CSDC2-201ENST00000306149 LRRCC1Q9C099 1032 aa18.55■□□□□ 0.56
CSDC2-201ENST00000306149 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
CSDC2-201ENST00000306149 NCLP19338 710 aaKnown RBP18.55■□□□□ 0.56
CSDC2-201ENST00000306149 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
CSDC2-201ENST00000306149 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
CSDC2-201ENST00000306149 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
CSDC2-201ENST00000306149 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
CSDC2-201ENST00000306149 TRIM6-TRIM34B2RNG4 842 aa18.54■□□□□ 0.56
CSDC2-201ENST00000306149 OSBPL3Q9H4L5 887 aa18.54■□□□□ 0.56
CSDC2-201ENST00000306149 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
CSDC2-201ENST00000306149 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
CSDC2-201ENST00000306149 IL1RAPL2Q9NP60 686 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 PIK3C2AO00443 1686 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 GNAI3P08754 354 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 MX1P20591 662 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 NEK4P51957 841 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 ATP8B2P98198 1209 aa18.53■□□□□ 0.56
CSDC2-201ENST00000306149 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
CSDC2-201ENST00000306149 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
CSDC2-201ENST00000306149 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
CSDC2-201ENST00000306149 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
CSDC2-201ENST00000306149 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
CSDC2-201ENST00000306149 USP44Q9H0E7 712 aa18.52■□□□□ 0.56
CSDC2-201ENST00000306149 NUCB2P80303 420 aa18.52■□□□□ 0.55
CSDC2-201ENST00000306149 PALD1Q9ULE6 856 aa18.52■□□□□ 0.55
CSDC2-201ENST00000306149 CYP2E1P05181 493 aaPredicted RBP18.51■□□□□ 0.55
CSDC2-201ENST00000306149 SALL3Q9BXA9 1300 aa18.51■□□□□ 0.55
CSDC2-201ENST00000306149 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
CSDC2-201ENST00000306149 HDGFL1Q5TGJ6 251 aa18.51■□□□□ 0.55
CSDC2-201ENST00000306149 THEMISQ8N1K5 641 aaPredicted RBP18.51■□□□□ 0.55
CSDC2-201ENST00000306149 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
CSDC2-201ENST00000306149 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
CSDC2-201ENST00000306149 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
CSDC2-201ENST00000306149 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
CSDC2-201ENST00000306149 ESYT1Q9BSJ8 1104 aa18.5■□□□□ 0.55
CSDC2-201ENST00000306149 ANO2Q9NQ90 1003 aa18.5■□□□□ 0.55
CSDC2-201ENST00000306149 CAVIN1Q6NZI2 390 aaKnown RBP18.5■□□□□ 0.55
CSDC2-201ENST00000306149 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
CSDC2-201ENST00000306149 NUTM1Q86Y26 1132 aa18.49■□□□□ 0.55
CSDC2-201ENST00000306149 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
CSDC2-201ENST00000306149 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
CSDC2-201ENST00000306149 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
CSDC2-201ENST00000306149 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
CSDC2-201ENST00000306149 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
CSDC2-201ENST00000306149 ESPNB1AK53 854 aa18.48■□□□□ 0.55
CSDC2-201ENST00000306149 PRPF40AO75400 957 aaKnown RBP18.48■□□□□ 0.55
CSDC2-201ENST00000306149 ANXA1P04083 346 aa18.48■□□□□ 0.55
CSDC2-201ENST00000306149 CHMLP26374 656 aa18.48■□□□□ 0.55
CSDC2-201ENST00000306149 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
CSDC2-201ENST00000306149 TMX3Q96JJ7 454 aa18.47■□□□□ 0.55
CSDC2-201ENST00000306149 IL25Q9H293 177 aa18.47■□□□□ 0.55
CSDC2-201ENST00000306149 KCNQ3O43525 872 aa18.47■□□□□ 0.55
CSDC2-201ENST00000306149 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
CSDC2-201ENST00000306149 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
CSDC2-201ENST00000306149 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
CSDC2-201ENST00000306149 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
CSDC2-201ENST00000306149 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
CSDC2-201ENST00000306149 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
CSDC2-201ENST00000306149 SLIT1O75093 1534 aa18.45■□□□□ 0.54
CSDC2-201ENST00000306149 XRN1Q8IZH2 1706 aaKnown RBP18.45■□□□□ 0.54
CSDC2-201ENST00000306149 NBPF7P0C2Y1 421 aaPredicted RBP18.45■□□□□ 0.54
CSDC2-201ENST00000306149 NASPP49321 788 aaPredicted RBP18.44■□□□□ 0.54
CSDC2-201ENST00000306149 CCDC173Q0VFZ6 552 aa18.44■□□□□ 0.54
CSDC2-201ENST00000306149 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
CSDC2-201ENST00000306149 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
CSDC2-201ENST00000306149 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
CSDC2-201ENST00000306149 ZSCAN23Q3MJ62 389 aa18.43■□□□□ 0.54
CSDC2-201ENST00000306149 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
CSDC2-201ENST00000306149 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
CSDC2-201ENST00000306149 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
CSDC2-201ENST00000306149 SRCIN1Q9C0H9 1055 aa18.43■□□□□ 0.54
CSDC2-201ENST00000306149 PHF8Q9UPP1 1060 aa18.43■□□□□ 0.54
CSDC2-201ENST00000306149 NAP1L5Q96NT1 182 aaPredicted RBP18.42■□□□□ 0.54
CSDC2-201ENST00000306149 STAP2Q9UGK3 403 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
CSDC2-201ENST00000306149 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 ZNF445P59923 1031 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms