RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KRT24Q2M2I5 525 aa17.31■□□□□ 0.36
CDT1-201ENST00000301019 FAM173BQ6P4H8 233 aa17.31■□□□□ 0.36
CDT1-201ENST00000301019 TMEM132EQ6IEE7 984 aa17.31■□□□□ 0.36
CDT1-201ENST00000301019 TRIM5Q9C035 493 aa17.31■□□□□ 0.36
CDT1-201ENST00000301019 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
CDT1-201ENST00000301019 NOS1P29475 1434 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 USP27XA6NNY8 438 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
CDT1-201ENST00000301019 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 TRIM66O15016 1216 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 BRD1O95696 1058 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 HMOX1P09601 288 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 CPA1P15085 419 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
CDT1-201ENST00000301019 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
CDT1-201ENST00000301019 A0A087WWV3 80 aa17.29■□□□□ 0.36
CDT1-201ENST00000301019 FBXO38Q6PIJ6 1188 aa17.29■□□□□ 0.36
CDT1-201ENST00000301019 GABPB1Q06547 395 aaPredicted RBP17.28■□□□□ 0.36
CDT1-201ENST00000301019 CCDC183Q5T5S1 534 aa17.28■□□□□ 0.36
CDT1-201ENST00000301019 TRPM1Q7Z4N2 1603 aa17.27■□□□□ 0.36
CDT1-201ENST00000301019 CTIFO43310 598 aaKnown RBP17.27■□□□□ 0.36
CDT1-201ENST00000301019 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.36
CDT1-201ENST00000301019 FILIP1Q7Z7B0 1213 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 NOL10Q9BSC4 688 aaKnown RBP17.26■□□□□ 0.35
CDT1-201ENST00000301019 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
CDT1-201ENST00000301019 EP400NLQ6ZTU2 488 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 LOC102724159A0A0B4J2E5 919 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 ANKRD65E5RJM6 399 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 DNM1Q05193 864 aaKnown RBP17.26■□□□□ 0.35
CDT1-201ENST00000301019 RAD51AP2Q09MP3 1159 aa17.26■□□□□ 0.35
CDT1-201ENST00000301019 PWP2Q15269 919 aaKnown RBP17.26■□□□□ 0.35
CDT1-201ENST00000301019 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
CDT1-201ENST00000301019 MX1P20591 662 aa17.25■□□□□ 0.35
CDT1-201ENST00000301019 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
CDT1-201ENST00000301019 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
CDT1-201ENST00000301019 GPATCH11Q8N954 259 aa17.25■□□□□ 0.35
CDT1-201ENST00000301019 SYNMO15061 1565 aa17.25■□□□□ 0.35
CDT1-201ENST00000301019 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CDT1-201ENST00000301019 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 FEZ2Q9UHY8 353 aaPredicted RBP17.24■□□□□ 0.35
CDT1-201ENST00000301019 KIF1BO60333 1816 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 REC8O95072 547 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 CEP135Q66GS9 1140 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
CDT1-201ENST00000301019 ERC2O15083 957 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 IDI1Q13907 227 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
CDT1-201ENST00000301019 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
CDT1-201ENST00000301019 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
CDT1-201ENST00000301019 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
CDT1-201ENST00000301019 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
CDT1-201ENST00000301019 LCMT1Q9UIC8 334 aa17.22■□□□□ 0.35
CDT1-201ENST00000301019 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
CDT1-201ENST00000301019 MROH2AA6NES4 1674 aa17.22■□□□□ 0.35
CDT1-201ENST00000301019 SMTNL1A8MU46 457 aa17.21■□□□□ 0.35
CDT1-201ENST00000301019 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
CDT1-201ENST00000301019 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
CDT1-201ENST00000301019 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
CDT1-201ENST00000301019 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
CDT1-201ENST00000301019 ERVK-7P63135 1459 aa17.21■□□□□ 0.35
CDT1-201ENST00000301019 KRBA2Q6ZNG9 492 aa17.21■□□□□ 0.34
CDT1-201ENST00000301019 CABP2Q9NPB3 220 aa17.21■□□□□ 0.34
CDT1-201ENST00000301019 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 SYT10Q6XYQ8 523 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 CCDC144CPQ8IYA2 1237 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 ADGRF5Q8IZF2 1346 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 ST5P78524 1137 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 UVSSAQ2YD98 709 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
CDT1-201ENST00000301019 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
CDT1-201ENST00000301019 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
CDT1-201ENST00000301019 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
CDT1-201ENST00000301019 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
CDT1-201ENST00000301019 ZNF446Q9NWS9 450 aa17.19■□□□□ 0.34
CDT1-201ENST00000301019 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
CDT1-201ENST00000301019 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
CDT1-201ENST00000301019 CLIP2Q9UDT6 1046 aa17.18■□□□□ 0.34
CDT1-201ENST00000301019 SEC31AO94979 1220 aaKnown RBP17.18■□□□□ 0.34
CDT1-201ENST00000301019 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
CDT1-201ENST00000301019 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
CDT1-201ENST00000301019 MYOM2P54296 1465 aa17.18■□□□□ 0.34
CDT1-201ENST00000301019 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
CDT1-201ENST00000301019 APPP05067 770 aa17.17■□□□□ 0.34
CDT1-201ENST00000301019 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
CDT1-201ENST00000301019 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms