RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
TMEM41B-201ENST00000299596 SSFA2P28290 1259 aa18.8■□□□□ 0.6
TMEM41B-201ENST00000299596 C4BP0C0L5 1744 aa18.79■□□□□ 0.6
TMEM41B-201ENST00000299596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.79■□□□□ 0.6
TMEM41B-201ENST00000299596 ITPK1Q13572 414 aa18.79■□□□□ 0.6
TMEM41B-201ENST00000299596 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
TMEM41B-201ENST00000299596 TAF1LQ8IZX4 1826 aa18.78■□□□□ 0.6
TMEM41B-201ENST00000299596 DIAPH1O60610 1272 aaKnown RBP18.78■□□□□ 0.6
TMEM41B-201ENST00000299596 PHF14O94880 888 aa18.78■□□□□ 0.6
TMEM41B-201ENST00000299596 KDM6AO15550 1401 aaPredicted RBP18.77■□□□□ 0.6
TMEM41B-201ENST00000299596 GPR162Q16538 588 aa18.77■□□□□ 0.6
TMEM41B-201ENST00000299596 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
TMEM41B-201ENST00000299596 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
TMEM41B-201ENST00000299596 GNPATO15228 680 aa18.76■□□□□ 0.59
TMEM41B-201ENST00000299596 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
TMEM41B-201ENST00000299596 NFATC2IPQ8NCF5 419 aa18.76■□□□□ 0.59
TMEM41B-201ENST00000299596 HMOX1P09601 288 aa18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 NLGN2Q8NFZ4 835 aa18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
TMEM41B-201ENST00000299596 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
TMEM41B-201ENST00000299596 GOLGB1Q14789 3259 aaKnown RBP18.72■□□□□ 0.59
TMEM41B-201ENST00000299596 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
TMEM41B-201ENST00000299596 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
TMEM41B-201ENST00000299596 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
TMEM41B-201ENST00000299596 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
TMEM41B-201ENST00000299596 CNTNAP4Q9C0A0 1308 aa18.7■□□□□ 0.58
TMEM41B-201ENST00000299596 ADRA2BP18089 450 aa18.7■□□□□ 0.58
TMEM41B-201ENST00000299596 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
TMEM41B-201ENST00000299596 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
TMEM41B-201ENST00000299596 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
TMEM41B-201ENST00000299596 LGR6Q9HBX8 967 aa18.69■□□□□ 0.58
TMEM41B-201ENST00000299596 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
TMEM41B-201ENST00000299596 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
TMEM41B-201ENST00000299596 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
TMEM41B-201ENST00000299596 GRIN3BO60391 1043 aa18.68■□□□□ 0.58
TMEM41B-201ENST00000299596 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
TMEM41B-201ENST00000299596 ARHGEF1Q92888 912 aaKnown RBP18.67■□□□□ 0.58
TMEM41B-201ENST00000299596 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
TMEM41B-201ENST00000299596 RFC4P35249 363 aa18.66■□□□□ 0.58
TMEM41B-201ENST00000299596 ZNF784Q8NCA9 323 aaPredicted RBP18.66■□□□□ 0.58
TMEM41B-201ENST00000299596 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
TMEM41B-201ENST00000299596 YBX3P16989 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
TMEM41B-201ENST00000299596 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
TMEM41B-201ENST00000299596 MMP10P09238 476 aa18.64■□□□□ 0.57
TMEM41B-201ENST00000299596 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
TMEM41B-201ENST00000299596 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
TMEM41B-201ENST00000299596 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
TMEM41B-201ENST00000299596 GYS1P13807 737 aa18.62■□□□□ 0.57
TMEM41B-201ENST00000299596 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
TMEM41B-201ENST00000299596 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
TMEM41B-201ENST00000299596 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
TMEM41B-201ENST00000299596 COL5A3P25940 1745 aaPredicted RBP18.61■□□□□ 0.57
TMEM41B-201ENST00000299596 MRC1P22897 1456 aa18.61■□□□□ 0.57
TMEM41B-201ENST00000299596 CHD4Q14839 1912 aa18.6■□□□□ 0.57
TMEM41B-201ENST00000299596 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
TMEM41B-201ENST00000299596 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
TMEM41B-201ENST00000299596 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
TMEM41B-201ENST00000299596 CCDC87Q9NVE4 849 aa18.59■□□□□ 0.57
TMEM41B-201ENST00000299596 TEFQ10587 303 aa18.58■□□□□ 0.57
TMEM41B-201ENST00000299596 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.57
TMEM41B-201ENST00000299596 IL17REQ8NFR9 667 aa18.58■□□□□ 0.57
TMEM41B-201ENST00000299596 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.57
TMEM41B-201ENST00000299596 CYP19A1P11511 503 aaPredicted RBP18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 PRKAR2BP31323 418 aa18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 TGFB2P61812 414 aa18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
TMEM41B-201ENST00000299596 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
TMEM41B-201ENST00000299596 MYH14Q7Z406 1995 aaKnown RBP18.56■□□□□ 0.56
TMEM41B-201ENST00000299596 FCHSD2O94868 740 aa18.56■□□□□ 0.56
TMEM41B-201ENST00000299596 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
TMEM41B-201ENST00000299596 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.564e-7■■□□□ 12.7
TMEM41B-201ENST00000299596 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
TMEM41B-201ENST00000299596 TJP1Q07157 1748 aa18.55■□□□□ 0.56
TMEM41B-201ENST00000299596 ZPR1O75312 459 aa18.55■□□□□ 0.56
TMEM41B-201ENST00000299596 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
TMEM41B-201ENST00000299596 STARD3NLO95772 234 aa18.54■□□□□ 0.56
TMEM41B-201ENST00000299596 FKBP8Q14318 412 aa18.54■□□□□ 0.56
TMEM41B-201ENST00000299596 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
TMEM41B-201ENST00000299596 SOS1Q07889 1333 aaPredicted RBP18.54■□□□□ 0.56
TMEM41B-201ENST00000299596 TEX13AQ9BXU3 409 aaPredicted RBP18.53■□□□□ 0.56
TMEM41B-201ENST00000299596 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
TMEM41B-201ENST00000299596 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
TMEM41B-201ENST00000299596 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
TMEM41B-201ENST00000299596 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.55
TMEM41B-201ENST00000299596 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 TM4SF1P30408 202 aa18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 USPL1Q5W0Q7 1092 aa18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 ZNF496Q96IT1 587 aaPredicted RBP18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
TMEM41B-201ENST00000299596 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
TMEM41B-201ENST00000299596 C4AP0C0L4 1744 aa18.5■□□□□ 0.55
TMEM41B-201ENST00000299596 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms