RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 SKIDA1Q1XH10 827 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
CDH23-202ENST00000299366 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
CDH23-202ENST00000299366 TNNT3P45378 269 aaPredicted RBP17.6■□□□□ 0.41
CDH23-202ENST00000299366 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
CDH23-202ENST00000299366 TOM1L2Q6ZVM7 507 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 HCLS1P14317 486 aaPredicted RBP17.6■□□□□ 0.41
CDH23-202ENST00000299366 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 PDCP20941 246 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 CABP4P57796 275 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 G2E3Q7L622 706 aa17.6■□□□□ 0.41
CDH23-202ENST00000299366 TMX3Q96JJ7 454 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 CCT2P78371 535 aaKnown RBP17.59■□□□□ 0.41
CDH23-202ENST00000299366 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
CDH23-202ENST00000299366 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
CDH23-202ENST00000299366 ZBTB9Q96C00 473 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 MYD88Q99836 296 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
CDH23-202ENST00000299366 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
CDH23-202ENST00000299366 DISP1Q96F81 1524 aa17.58■□□□□ 0.41
CDH23-202ENST00000299366 A2MP01023 1474 aa17.58■□□□□ 0.41
CDH23-202ENST00000299366 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
CDH23-202ENST00000299366 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
CDH23-202ENST00000299366 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.4
CDH23-202ENST00000299366 CNNM1Q9NRU3 951 aa17.58■□□□□ 0.4
CDH23-202ENST00000299366 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
CDH23-202ENST00000299366 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 G3V3G9 751 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
CDH23-202ENST00000299366 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 NOC3LQ8WTT2 800 aaKnown RBP17.57■□□□□ 0.4
CDH23-202ENST00000299366 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 MAGI2Q86UL8 1455 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 PDE1AP54750 535 aa17.57■□□□□ 0.4
CDH23-202ENST00000299366 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
CDH23-202ENST00000299366 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
CDH23-202ENST00000299366 IDH1O75874 414 aaKnown RBP17.56■□□□□ 0.4
CDH23-202ENST00000299366 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
CDH23-202ENST00000299366 CHRNA2Q15822 529 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
CDH23-202ENST00000299366 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 PRDM11Q9NQV5 511 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 GLRX3O76003 335 aaKnown RBP17.55■□□□□ 0.4
CDH23-202ENST00000299366 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 HAND2P61296 217 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 ZBTB3Q9H5J0 574 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
CDH23-202ENST00000299366 ZSCAN23Q3MJ62 389 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
CDH23-202ENST00000299366 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
CDH23-202ENST00000299366 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 ERICH2A1L162 156 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 SAFBQ15424 915 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDH23-202ENST00000299366 MTHFSDQ2M296 383 aaKnown RBP17.54■□□□□ 0.4
CDH23-202ENST00000299366 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
CDH23-202ENST00000299366 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
CDH23-202ENST00000299366 BIN1O00499 593 aa17.53■□□□□ 0.4
CDH23-202ENST00000299366 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
CDH23-202ENST00000299366 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
CDH23-202ENST00000299366 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
CDH23-202ENST00000299366 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
CDH23-202ENST00000299366 ANKRD44Q8N8A2 993 aa17.52■□□□□ 0.4
CDH23-202ENST00000299366 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.4
CDH23-202ENST00000299366 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
CDH23-202ENST00000299366 TTC12Q9H892 705 aaPredicted RBP17.52■□□□□ 0.4
CDH23-202ENST00000299366 CEP126Q9P2H0 1117 aa17.52■□□□□ 0.4
CDH23-202ENST00000299366 ANKRD36BQ8N2N9 1353 aa17.52■□□□□ 0.39
CDH23-202ENST00000299366 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.39
CDH23-202ENST00000299366 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.39
CDH23-202ENST00000299366 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.39
CDH23-202ENST00000299366 GJB2P29033 226 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 TSR1Q2NL82 804 aaKnown RBP17.51■□□□□ 0.39
CDH23-202ENST00000299366 RHPN1Q8TCX5 695 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
CDH23-202ENST00000299366 PDCL3Q9H2J4 239 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
CDH23-202ENST00000299366 A0A087WZG4 1122 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
CDH23-202ENST00000299366 LIMCH1Q9UPQ0 1083 aa17.51■□□□□ 0.39
CDH23-202ENST00000299366 SERPINC1P01008 464 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 GPTP24298 496 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 CBX1P83916 185 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
CDH23-202ENST00000299366 CCDC158Q5M9N0 1113 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
CDH23-202ENST00000299366 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms