RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
LSM12-201ENST00000293406 RRP9O43818 475 aaKnown RBP23.41■■□□□ 1.34
LSM12-201ENST00000293406 MCCP23508 829 aa23.41■■□□□ 1.34
LSM12-201ENST00000293406 TOPAZ1Q8N9V7 1692 aa23.4■■□□□ 1.34
LSM12-201ENST00000293406 TPM2P07951 284 aa23.39■■□□□ 1.34
LSM12-201ENST00000293406 MX1P20591 662 aa23.39■■□□□ 1.34
LSM12-201ENST00000293406 HS1BP3Q53T59 392 aa23.39■■□□□ 1.34
LSM12-201ENST00000293406 GNAI3P08754 354 aa23.39■■□□□ 1.33
LSM12-201ENST00000293406 CHAMP1Q96JM3 812 aa23.39■■□□□ 1.33
LSM12-201ENST00000293406 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
LSM12-201ENST00000293406 FOXD4L5Q5VV16 416 aaPredicted RBP23.38■■□□□ 1.33
LSM12-201ENST00000293406 FOXD4L4Q8WXT5 416 aaPredicted RBP23.38■■□□□ 1.33
LSM12-201ENST00000293406 TMEM2Q9UHN6 1383 aa23.38■■□□□ 1.33
LSM12-201ENST00000293406 TMEM63CQ9P1W3 806 aa23.38■■□□□ 1.33
LSM12-201ENST00000293406 PDLIM2Q96JY6 352 aa23.37■■□□□ 1.33
LSM12-201ENST00000293406 TRIM6-TRIM34B2RNG4 842 aa23.37■■□□□ 1.33
LSM12-201ENST00000293406 FLIIQ13045 1269 aa23.37■■□□□ 1.33
LSM12-201ENST00000293406 FKBP5Q13451 457 aaPredicted RBP23.37■■□□□ 1.33
LSM12-201ENST00000293406 LRSAM1Q6UWE0 723 aa23.37■■□□□ 1.33
LSM12-201ENST00000293406 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 ANAPC15P60006 121 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 CUL4AQ13619 759 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 RILPL2Q969X0 211 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 ANO2Q9NQ90 1003 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 FLT4P35916 1363 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 KDRP35968 1356 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 TNRQ92752 1358 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 MBD3O95983 291 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 CHMLP26374 656 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 ATP8B2P98198 1209 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 KIAA1211Q6ZU35 1233 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 PALD1Q9ULE6 856 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 ADAMTS13Q76LX8 1427 aa23.36■■□□□ 1.33
LSM12-201ENST00000293406 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
LSM12-201ENST00000293406 SBNO1A3KN83 1393 aa23.35■■□□□ 1.33
LSM12-201ENST00000293406 OFD1O75665 1012 aa23.35■■□□□ 1.33
LSM12-201ENST00000293406 BRD1O95696 1058 aa23.35■■□□□ 1.33
LSM12-201ENST00000293406 CCDC30Q5VVM6 783 aa23.35■■□□□ 1.33
LSM12-201ENST00000293406 SSH2Q76I76 1423 aa23.35■■□□□ 1.33
LSM12-201ENST00000293406 SYCE3A1L190 88 aa23.34■■□□□ 1.33
LSM12-201ENST00000293406 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
LSM12-201ENST00000293406 TTC21AQ8NDW8 1320 aa23.34■■□□□ 1.33
LSM12-201ENST00000293406 GLIPR1L2Q4G1C9 344 aa23.34■■□□□ 1.33
LSM12-201ENST00000293406 INTS4Q96HW7 963 aaKnown RBP23.33■■□□□ 1.33
LSM12-201ENST00000293406 EYA1Q99502 592 aa23.33■■□□□ 1.33
LSM12-201ENST00000293406 SRCIN1Q9C0H9 1055 aa23.33■■□□□ 1.33
LSM12-201ENST00000293406 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.33■■□□□ 1.33
LSM12-201ENST00000293406 STAP2Q9UGK3 403 aa23.33■■□□□ 1.33
LSM12-201ENST00000293406 NOL7Q9UMY1 257 aaKnown RBP23.33■■□□□ 1.33
LSM12-201ENST00000293406 IGSF1Q8N6C5 1336 aa23.32■■□□□ 1.32
LSM12-201ENST00000293406 AMPHP49418 695 aa23.32■■□□□ 1.32
LSM12-201ENST00000293406 FMN2Q9NZ56 1722 aa23.32■■□□□ 1.32
LSM12-201ENST00000293406 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
LSM12-201ENST00000293406 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
LSM12-201ENST00000293406 TUBGCP6Q96RT7 1819 aa23.32■■□□□ 1.32
LSM12-201ENST00000293406 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
LSM12-201ENST00000293406 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
LSM12-201ENST00000293406 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
LSM12-201ENST00000293406 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
LSM12-201ENST00000293406 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
LSM12-201ENST00000293406 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
LSM12-201ENST00000293406 IL17RAQ96F46 866 aa23.28■■□□□ 1.32
LSM12-201ENST00000293406 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
LSM12-201ENST00000293406 ZNF500O60304 480 aaPredicted RBP23.27■■□□□ 1.32
LSM12-201ENST00000293406 UPF3BQ9BZI7 483 aaKnown RBP23.27■■□□□ 1.32
LSM12-201ENST00000293406 FAM208AQ9UK61 1670 aaKnown RBP23.27■■□□□ 1.32
LSM12-201ENST00000293406 AOX1Q06278 1338 aa23.27■■□□□ 1.32
LSM12-201ENST00000293406 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
LSM12-201ENST00000293406 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.27■■□□□ 1.32
LSM12-201ENST00000293406 NGDNQ8NEJ9 315 aaKnown RBP23.26■■□□□ 1.31
LSM12-201ENST00000293406 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
LSM12-201ENST00000293406 LTKP29376 864 aa23.26■■□□□ 1.31
LSM12-201ENST00000293406 USP44Q9H0E7 712 aa23.26■■□□□ 1.31
LSM12-201ENST00000293406 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
LSM12-201ENST00000293406 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
LSM12-201ENST00000293406 SYAP1Q96A49 352 aaPredicted RBP23.25■■□□□ 1.31
LSM12-201ENST00000293406 RNF214Q8ND24 703 aa23.25■■□□□ 1.31
LSM12-201ENST00000293406 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
LSM12-201ENST00000293406 ZKSCAN5Q9Y2L8 839 aa23.25■■□□□ 1.31
LSM12-201ENST00000293406 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
LSM12-201ENST00000293406 TERF1P54274 439 aa23.24■■□□□ 1.31
LSM12-201ENST00000293406 SLC26A8Q96RN1 970 aa23.24■■□□□ 1.31
LSM12-201ENST00000293406 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
LSM12-201ENST00000293406 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
LSM12-201ENST00000293406 CCDC39Q9UFE4 941 aa23.23■■□□□ 1.31
LSM12-201ENST00000293406 PTPRUQ92729 1446 aa23.23■■□□□ 1.31
LSM12-201ENST00000293406 MCM5P33992 734 aa23.22■■□□□ 1.31
LSM12-201ENST00000293406 HSPA4P34932 840 aa23.22■■□□□ 1.31
LSM12-201ENST00000293406 SSH3Q8TE77 659 aa23.22■■□□□ 1.31
LSM12-201ENST00000293406 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
LSM12-201ENST00000293406 NUTM1Q86Y26 1132 aa23.22■■□□□ 1.31
LSM12-201ENST00000293406 IL25Q9H293 177 aa23.22■■□□□ 1.31
LSM12-201ENST00000293406 WDR33Q9C0J8 1336 aaKnown RBP23.22■■□□□ 1.31
LSM12-201ENST00000293406 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
LSM12-201ENST00000293406 FOXD4L6Q3SYB3 417 aaPredicted RBP23.21■■□□□ 1.31
LSM12-201ENST00000293406 FOXD4L3Q6VB84 417 aaPredicted RBP23.21■■□□□ 1.31
LSM12-201ENST00000293406 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
LSM12-201ENST00000293406 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
LSM12-201ENST00000293406 RAB11FIP3O75154 756 aa23.21■■□□□ 1.31
LSM12-201ENST00000293406 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms