RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PDE1AP54750 535 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 TAF7Q15545 349 aaPredicted RBP24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 PHF8Q9UPP1 1060 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 FSD2A1L4K1 749 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 CASC1Q6TDU7 716 aa24.6■■□□□ 1.53
SCUBE1-201ENST00000290460 XRCC6P12956 609 aaKnown RBP eCLIP24.59■■□□□ 1.53
SCUBE1-201ENST00000290460 ZBTB7CA1YPR0 619 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 SSFA2P28290 1259 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 GBP4Q96PP9 640 aa24.58■■□□□ 1.52
SCUBE1-201ENST00000290460 EIF5BO60841 1220 aaKnown RBP24.57■■□□□ 1.52
SCUBE1-201ENST00000290460 CHD2O14647 1828 aaKnown RBP24.57■■□□□ 1.52
SCUBE1-201ENST00000290460 GNAI3P08754 354 aa24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 OSBPL3Q9H4L5 887 aa24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 LRRFIP2Q9Y608 721 aaKnown RBP24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 PHAXQ9H814 394 aaKnown RBP24.56■■□□□ 1.52
SCUBE1-201ENST00000290460 PANK2Q9BZ23 570 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 RGPD2P0DJD1 1756 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 HDGFL1Q5TGJ6 251 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 LRRCC1Q9C099 1032 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 TUBGCP6Q96RT7 1819 aa24.55■■□□□ 1.52
SCUBE1-201ENST00000290460 N4BP2Q86UW6 1770 aaPredicted RBP24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 PLEKHG5O94827 1062 aa24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
SCUBE1-201ENST00000290460 SALL3Q9BXA9 1300 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 ERC2O15083 957 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 REC8O95072 547 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 IP6K1Q92551 441 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 USP44Q9H0E7 712 aa24.53■■□□□ 1.52
SCUBE1-201ENST00000290460 LGR6Q9HBX8 967 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 NFAT5O94916 1531 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
SCUBE1-201ENST00000290460 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 IBTKQ9P2D0 1353 aaPredicted RBP24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 MX1P20591 662 aa24.51■■□□□ 1.51
SCUBE1-201ENST00000290460 BABAM1Q9NWV8 329 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 CEMIPQ8WUJ3 1361 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 PSME1Q06323 249 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 ANKLE2Q86XL3 938 aa24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
SCUBE1-201ENST00000290460 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
SCUBE1-201ENST00000290460 SOS1Q07889 1333 aaPredicted RBP24.49■■□□□ 1.51
SCUBE1-201ENST00000290460 KCNQ3O43525 872 aa24.48■■□□□ 1.51
SCUBE1-201ENST00000290460 PXDNLA1KZ92 1463 aa24.48■■□□□ 1.51
SCUBE1-201ENST00000290460 PKP1Q13835 747 aa24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 ST18O60284 1047 aa24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 XPCQ01831 940 aaPredicted RBP24.47■■□□□ 1.51
SCUBE1-201ENST00000290460 EIF4A1P60842 406 aaKnown RBP24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 IL1RAPL2Q9NP60 686 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 TRIM6-TRIM34B2RNG4 842 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 ZGPATQ8N5A5 531 aaKnown RBP24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
SCUBE1-201ENST00000290460 BAG4O95429 457 aaKnown RBP24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 MED1Q15648 1581 aaPredicted RBP24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 KDM3BQ7LBC6 1761 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 ANXA1P04083 346 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 UNC5CLQ8IV45 518 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 ESYT1Q9BSJ8 1104 aa24.45■■□□□ 1.5
SCUBE1-201ENST00000290460 MRE11P49959 708 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 MPRIPQ6WCQ1 1025 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 GRPEL1Q9HAV7 217 aa24.44■■□□□ 1.5
SCUBE1-201ENST00000290460 ADGRL3Q9HAR2 1447 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 GAS2L3Q86XJ1 694 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 SRCIN1Q9C0H9 1055 aa24.43■■□□□ 1.5
SCUBE1-201ENST00000290460 SKOR2Q2VWA4 1001 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 ZNF530Q6P9A1 599 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 CLEC17AQ6ZS10 378 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 NBPF7P0C2Y1 421 aaPredicted RBP24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 SSH3Q8TE77 659 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
SCUBE1-201ENST00000290460 CHMLP26374 656 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PI4KAP2A4QPH2 592 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PI4KAP1Q8N8J0 262 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 KCNH5Q8NCM2 988 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 STAP2Q9UGK3 403 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 PALD1Q9ULE6 856 aa24.41■■□□□ 1.5
SCUBE1-201ENST00000290460 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 GOLGA6L22H0YM25 854 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 NEK4P51957 841 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 TEFQ10587 303 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 BTBD11A6QL63 1104 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 SURF6O75683 361 aaKnown RBP24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 CYP2E1P05181 493 aaPredicted RBP24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 ANO2Q9NQ90 1003 aa24.4■■□□□ 1.5
SCUBE1-201ENST00000290460 PTMSP20962 102 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 NUCB2P80303 420 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 RRAGDQ9NQL2 400 aaPredicted RBP24.39■■□□□ 1.5
SCUBE1-201ENST00000290460 PXDNQ92626 1479 aa24.39■■□□□ 1.49
SCUBE1-201ENST00000290460 MCTP1Q6DN14 999 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 SRGAP3O43295 1099 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 AKAP4Q5JQC9 854 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 DNAAF4Q8WXU2 420 aa24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 ZNF142P52746 1687 aaPredicted RBP24.38■■□□□ 1.49
SCUBE1-201ENST00000290460 MAP4K4O95819 1239 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms