RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 POLD1P28340 1107 aa13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 RXRBP28702 533 aa13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 GNL3LQ9NVN8 582 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 TESK2Q96S53 571 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 TSPY26PQ9H489 355 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 CNNM1Q9NRU3 951 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 CBX1P83916 185 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 SYNMO15061 1565 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 TPD52L1Q16890 204 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 QTRT2Q9H974 415 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-201ENST00000289547 SBNO1A3KN83 1393 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 STK32BQ9NY57 414 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 H3BQV1 296 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 UNC13BO14795 1591 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
NPC1L1-201ENST00000289547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 TOMM22Q9NS69 142 aa13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-201ENST00000289547 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 HYPKQ9NX55 129 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 POLKQ9UBT6 870 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 KIF3AQ9Y496 699 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 CROCC2H7BZ55 1655 aa13.58□□□□□ -0.23
NPC1L1-201ENST00000289547 CLCN1P35523 988 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 PDCL2Q8N4E4 241 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 NEUROD6Q96NK8 337 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 IGHMBP2P38935 993 aaKnown RBP13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 ERC1Q8IUD2 1116 aa13.58□□□□□ -0.24
NPC1L1-201ENST00000289547 ERC2O15083 957 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 CCDC34Q96HJ3 373 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 PDE4CQ08493 712 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
NPC1L1-201ENST00000289547 FAM184AQ8NB25 1140 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 ST5P78524 1137 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 RNF17Q9BXT8 1623 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 CDC45O75419 566 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 HSP90B2PQ58FF3 399 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 RUFY2Q8WXA3 655 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 SMC3Q9UQE7 1217 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
NPC1L1-201ENST00000289547 ERICH4A6NGS2 130 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 GNAI2P04899 355 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 CTDP1Q9Y5B0 961 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 BCAR3O75815 825 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
NPC1L1-201ENST00000289547 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
NPC1L1-201ENST00000289547 TBC1D2BQ9UPU7 963 aa13.54□□□□□ -0.24
NPC1L1-201ENST00000289547 FBLN1P23142 703 aa13.54□□□□□ -0.24
NPC1L1-201ENST00000289547 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 EYA1Q99502 592 aa13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 CEP152O94986 1710 aa13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 CLASRPQ8N2M8 674 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-201ENST00000289547 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.24
NPC1L1-201ENST00000289547 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.24
NPC1L1-201ENST00000289547 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.24
NPC1L1-201ENST00000289547 KIDINS220Q9ULH0 1771 aa13.52□□□□□ -0.24
NPC1L1-201ENST00000289547 RABEP1Q15276 862 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms