RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 MRC1P22897 1456 aa25.36■■□□□ 1.65
KRTCAP3-201ENST00000288873 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
KRTCAP3-201ENST00000288873 TEFQ10587 303 aa25.36■■□□□ 1.65
KRTCAP3-201ENST00000288873 LMOD3Q0VAK6 560 aa25.35■■□□□ 1.65
KRTCAP3-201ENST00000288873 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
KRTCAP3-201ENST00000288873 PLSCR1O15162 318 aa25.34■■□□□ 1.65
KRTCAP3-201ENST00000288873 EZH2Q15910 746 aaKnown RBP25.32■■□□□ 1.64
KRTCAP3-201ENST00000288873 CAMKK2Q96RR4 588 aa25.32■■□□□ 1.64
KRTCAP3-201ENST00000288873 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
KRTCAP3-201ENST00000288873 ASAP1Q9ULH1 1129 aa25.32■■□□□ 1.64
KRTCAP3-201ENST00000288873 TRIM35Q9UPQ4 493 aa25.32■■□□□ 1.64
KRTCAP3-201ENST00000288873 RGPD3A6NKT7 1758 aaPredicted RBP25.31■■□□□ 1.64
KRTCAP3-201ENST00000288873 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
KRTCAP3-201ENST00000288873 RGPD4Q7Z3J3 1758 aa25.31■■□□□ 1.64
KRTCAP3-201ENST00000288873 SMARCC1Q92922 1105 aaPredicted RBP25.31■■□□□ 1.64
KRTCAP3-201ENST00000288873 ATG3Q9NT62 314 aa25.31■■□□□ 1.64
KRTCAP3-201ENST00000288873 PALLDQ8WX93 1383 aa25.3■■□□□ 1.64
KRTCAP3-201ENST00000288873 TXNRD1Q16881 649 aa25.28■■□□□ 1.64
KRTCAP3-201ENST00000288873 LY75O60449 1722 aa25.28■■□□□ 1.64
KRTCAP3-201ENST00000288873 PROM2Q8N271 834 aa25.27■■□□□ 1.64
KRTCAP3-201ENST00000288873 SLC39A6Q13433 755 aa25.26■■□□□ 1.63
KRTCAP3-201ENST00000288873 TAF7Q15545 349 aaPredicted RBP25.26■■□□□ 1.63
KRTCAP3-201ENST00000288873 PAPPAQ13219 1627 aa25.26■■□□□ 1.63
KRTCAP3-201ENST00000288873 BTBD11A6QL63 1104 aa25.25■■□□□ 1.63
KRTCAP3-201ENST00000288873 SALL2Q9Y467 1007 aaPredicted RBP25.25■■□□□ 1.63
KRTCAP3-201ENST00000288873 RREB1Q92766 1687 aa25.25■■□□□ 1.63
KRTCAP3-201ENST00000288873 RBM42Q9BTD8 480 aaKnown RBP25.23■■□□□ 1.63
KRTCAP3-201ENST00000288873 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 KCNQ4P56696 695 aa25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 CCDC27Q2M243 656 aa25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 NCBP3Q53F19 620 aaKnown RBP25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 SLC27A3Q5K4L6 730 aa25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 MIS18AQ9NYP9 233 aa25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 CCNL1Q9UK58 526 aaPredicted RBP25.22■■□□□ 1.63
KRTCAP3-201ENST00000288873 LOC102724428A0A0B4J2F2 783 aa25.21■■□□□ 1.63
KRTCAP3-201ENST00000288873 SIK1P57059 783 aa25.21■■□□□ 1.63
KRTCAP3-201ENST00000288873 ZNF790Q6PG37 636 aa25.21■■□□□ 1.63
KRTCAP3-201ENST00000288873 LRRC4BQ9NT99 713 aa25.21■■□□□ 1.63
KRTCAP3-201ENST00000288873 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.63
KRTCAP3-201ENST00000288873 WWC1Q8IX03 1113 aa25.2■■□□□ 1.62
KRTCAP3-201ENST00000288873 UBR2Q8IWV8 1755 aa25.19■■□□□ 1.62
KRTCAP3-201ENST00000288873 KCNQ3O43525 872 aa25.19■■□□□ 1.62
KRTCAP3-201ENST00000288873 NGEFQ8N5V2 710 aa25.19■■□□□ 1.62
KRTCAP3-201ENST00000288873 LRP5O75197 1615 aa25.19■■□□□ 1.62
KRTCAP3-201ENST00000288873 KCPQ6ZWJ8 1503 aa25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 ATP6V1AP38606 617 aa25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 SLC4A9Q96Q91 983 aa25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 LAS1LQ9Y4W2 734 aaKnown RBP25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
KRTCAP3-201ENST00000288873 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
KRTCAP3-201ENST00000288873 ZNF496Q96IT1 587 aaPredicted RBP25.16■■□□□ 1.62
KRTCAP3-201ENST00000288873 ITPK1Q13572 414 aa25.15■■□□□ 1.62
KRTCAP3-201ENST00000288873 FMNL2Q96PY5 1086 aa25.15■■□□□ 1.62
KRTCAP3-201ENST00000288873 BABAM1Q9NWV8 329 aa25.15■■□□□ 1.62
KRTCAP3-201ENST00000288873 ZNF831Q5JPB2 1677 aa25.15■■□□□ 1.62
KRTCAP3-201ENST00000288873 TAF1LQ8IZX4 1826 aa25.14■■□□□ 1.62
KRTCAP3-201ENST00000288873 C5P01031 1676 aa25.14■■□□□ 1.62
KRTCAP3-201ENST00000288873 PSDA5PKW4 1024 aaPredicted RBP25.13■■□□□ 1.61
KRTCAP3-201ENST00000288873 CHL1O00533 1208 aa25.13■■□□□ 1.61
KRTCAP3-201ENST00000288873 CFAP44Q96MT7 982 aa25.13■■□□□ 1.61
KRTCAP3-201ENST00000288873 GNAI1P63096 354 aa25.12■■□□□ 1.61
KRTCAP3-201ENST00000288873 NBPF14Q5TI25 921 aa25.12■■□□□ 1.61
KRTCAP3-201ENST00000288873 IFT57Q9NWB7 429 aa25.12■■□□□ 1.61
KRTCAP3-201ENST00000288873 HEG1Q9ULI3 1381 aa25.12■■□□□ 1.61
KRTCAP3-201ENST00000288873 TJP1Q07157 1748 aa25.12■■□□□ 1.61
KRTCAP3-201ENST00000288873 ZNF853P0CG23 659 aa25.11■■□□□ 1.61
KRTCAP3-201ENST00000288873 WDR63Q8IWG1 891 aa25.11■■□□□ 1.61
KRTCAP3-201ENST00000288873 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
KRTCAP3-201ENST00000288873 LINC00116Q8NCU8 138 aa25.11■■□□□ 1.61
KRTCAP3-201ENST00000288873 HMGB2P26583 209 aaKnown RBP25.1■■□□□ 1.61
KRTCAP3-201ENST00000288873 EIF4A1P60842 406 aaKnown RBP25.1■■□□□ 1.61
KRTCAP3-201ENST00000288873 DNAJC10Q8IXB1 793 aa25.1■■□□□ 1.61
KRTCAP3-201ENST00000288873 ANO8Q9HCE9 1232 aaPredicted RBP25.1■■□□□ 1.61
KRTCAP3-201ENST00000288873 IL16Q14005 1332 aa25.1■■□□□ 1.61
KRTCAP3-201ENST00000288873 CICQ96RK0 1608 aaPredicted RBP25.09■■□□□ 1.61
KRTCAP3-201ENST00000288873 STK32BQ9NY57 414 aa25.09■■□□□ 1.61
KRTCAP3-201ENST00000288873 COL5A3P25940 1745 aaPredicted RBP25.09■■□□□ 1.61
KRTCAP3-201ENST00000288873 MBIPQ9NS73 344 aa25.08■■□□□ 1.61
KRTCAP3-201ENST00000288873 C4BP0C0L5 1744 aa25.08■■□□□ 1.61
KRTCAP3-201ENST00000288873 ZNF521Q96K83 1311 aa25.08■■□□□ 1.6
KRTCAP3-201ENST00000288873 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
KRTCAP3-201ENST00000288873 ZNF827Q17R98 1081 aa25.07■■□□□ 1.6
KRTCAP3-201ENST00000288873 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
KRTCAP3-201ENST00000288873 AKT1S1Q96B36 256 aa25.06■■□□□ 1.6
KRTCAP3-201ENST00000288873 TEX13AQ9BXU3 409 aaPredicted RBP25.06■■□□□ 1.6
KRTCAP3-201ENST00000288873 R3HDM1Q15032 1099 aaKnown RBP25.05■■□□□ 1.6
KRTCAP3-201ENST00000288873 SLC15A2Q16348 729 aa25.05■■□□□ 1.6
KRTCAP3-201ENST00000288873 PRAMEF22A3QJZ6 481 aa25.04■■□□□ 1.6
KRTCAP3-201ENST00000288873 CYP19A1P11511 503 aaPredicted RBP25.04■■□□□ 1.6
KRTCAP3-201ENST00000288873 AK7Q96M32 723 aa25.04■■□□□ 1.6
KRTCAP3-201ENST00000288873 GIGYF1O75420 1035 aaPredicted RBP25.03■■□□□ 1.6
KRTCAP3-201ENST00000288873 STARD3NLO95772 234 aa25.03■■□□□ 1.6
KRTCAP3-201ENST00000288873 TSR2Q969E8 191 aaKnown RBP25.03■■□□□ 1.6
KRTCAP3-201ENST00000288873 CRKLP46109 303 aaKnown RBP25.02■■□□□ 1.6
KRTCAP3-201ENST00000288873 RC3H1Q5TC82 1133 aaKnown RBP25.02■■□□□ 1.6
KRTCAP3-201ENST00000288873 SPINK5Q9NQ38 1064 aaPredicted RBP25.02■■□□□ 1.6
KRTCAP3-201ENST00000288873 TFCP2L1Q9NZI6 479 aa25.02■■□□□ 1.6
KRTCAP3-201ENST00000288873 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms