RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 ZPR1O75312 459 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 MCM4P33991 863 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 CEBPAP49715 358 aaPredicted RBP17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 F6X3S4 739 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-202ENST00000286628 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 NUP62CLQ9H1M0 184 aa17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 PDCL3Q9H2J4 239 aa17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 DDX11Q96FC9 970 aa17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
KCNMA1-202ENST00000286628 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 SCAF11Q99590 1463 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 NSD2O96028 1365 aa17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 CBFA2T2O43439 604 aa17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 DEF6Q9H4E7 631 aa17.35■□□□□ 0.37
KCNMA1-202ENST00000286628 NOS1P29475 1434 aa17.34■□□□□ 0.37
KCNMA1-202ENST00000286628 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
KCNMA1-202ENST00000286628 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
KCNMA1-202ENST00000286628 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
KCNMA1-202ENST00000286628 C20orf194Q5TEA3 1177 aa17.34■□□□□ 0.37
KCNMA1-202ENST00000286628 PTPRCP08575 1304 aa17.33■□□□□ 0.37
KCNMA1-202ENST00000286628 FLIIQ13045 1269 aa17.33■□□□□ 0.37
KCNMA1-202ENST00000286628 NAPBQ9H115 298 aa17.33■□□□□ 0.37
KCNMA1-202ENST00000286628 MAP7D2Q96T17 732 aa17.33■□□□□ 0.37
KCNMA1-202ENST00000286628 A0A087WZG4 1122 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 ADAMTS2O95450 1211 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 GRPEL1Q9HAV7 217 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 TXLNBQ8N3L3 684 aa17.33■□□□□ 0.36
KCNMA1-202ENST00000286628 MINDY4BA8MYZ0 360 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 USP5P45974 858 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 PIBF1Q8WXW3 757 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 EXOC5O00471 708 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 ZNF76P36508 570 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 CCDC83Q8IWF9 413 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 FERMT3Q86UX7 667 aa17.32■□□□□ 0.36
KCNMA1-202ENST00000286628 FANCAO15360 1455 aa17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 TRIM27P14373 513 aa17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 MKNK2Q9HBH9 465 aa17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 POLR3DP05423 398 aaPredicted RBP17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 SH2B1Q9NRF2 756 aaPredicted RBP17.31■□□□□ 0.36
KCNMA1-202ENST00000286628 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-202ENST00000286628 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
KCNMA1-202ENST00000286628 SLC5A1P13866 664 aa17.3■□□□□ 0.36
KCNMA1-202ENST00000286628 KRI1Q8N9T8 703 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-202ENST00000286628 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-202ENST00000286628 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 MPNDQ8N594 471 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
KCNMA1-202ENST00000286628 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 ACEP12821 1306 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 FILIP1Q7Z7B0 1213 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 IQCA1Q86XH1 822 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 CRACR2BQ8N4Y2 399 aaPredicted RBP17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
KCNMA1-202ENST00000286628 MPHOSPH10O00566 681 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 ZNF213O14771 459 aa17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 ERLIN2O94905 339 aa17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 CCDC112Q8NEF3 446 aa17.27■□□□□ 0.36
KCNMA1-202ENST00000286628 CCDC181Q5TID7 509 aa17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 GPTP24298 496 aa17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 IL16Q14005 1332 aa17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
KCNMA1-202ENST00000286628 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms