RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
SCLT1-201ENST00000281142 NLRP6P59044 892 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 ZGPATQ8N5A5 531 aaKnown RBP13.98□□□□□ -0.17
SCLT1-201ENST00000281142 CRYBG1Q9Y4K1 1723 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 ANP32BQ92688 251 aaKnown RBP13.98□□□□□ -0.17
SCLT1-201ENST00000281142 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 COG3Q96JB2 828 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 FAM13BQ9NYF5 915 aa13.98□□□□□ -0.17
SCLT1-201ENST00000281142 CDC45O75419 566 aa13.97□□□□□ -0.17
SCLT1-201ENST00000281142 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 PTMSP20962 102 aa13.97□□□□□ -0.17
SCLT1-201ENST00000281142 PRKAR2BP31323 418 aa13.97□□□□□ -0.17
SCLT1-201ENST00000281142 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
SCLT1-201ENST00000281142 MED1Q15648 1581 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-201ENST00000281142 VAMP4O75379 141 aa13.96□□□□□ -0.17
SCLT1-201ENST00000281142 HMOX1P09601 288 aa13.96□□□□□ -0.17
SCLT1-201ENST00000281142 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.17
SCLT1-201ENST00000281142 NSFL1CQ9UNZ2 370 aaKnown RBP13.96□□□□□ -0.17
SCLT1-201ENST00000281142 PRPF40AO75400 957 aaKnown RBP13.96□□□□□ -0.17
SCLT1-201ENST00000281142 ZNF445P59923 1031 aa13.96□□□□□ -0.17
SCLT1-201ENST00000281142 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
SCLT1-201ENST00000281142 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.18
SCLT1-201ENST00000281142 ZBTB7CA1YPR0 619 aa13.95□□□□□ -0.18
SCLT1-201ENST00000281142 PLEKHM2Q8IWE5 1019 aa13.95□□□□□ -0.18
SCLT1-201ENST00000281142 IBTKQ9P2D0 1353 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-201ENST00000281142 APBB1O00213 710 aa13.95□□□□□ -0.18
SCLT1-201ENST00000281142 CYP2E1P05181 493 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-201ENST00000281142 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-201ENST00000281142 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
SCLT1-201ENST00000281142 SOX12O15370 315 aa13.94□□□□□ -0.18
SCLT1-201ENST00000281142 ZDHHC9Q9Y397 364 aa13.94□□□□□ -0.18
SCLT1-201ENST00000281142 SLIT3O75094 1523 aa13.94□□□□□ -0.18
SCLT1-201ENST00000281142 ARHGEF10O15013 1369 aa13.94□□□□□ -0.18
SCLT1-201ENST00000281142 LTN1O94822 1766 aa13.93□□□□□ -0.18
SCLT1-201ENST00000281142 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
SCLT1-201ENST00000281142 NFAT5O94916 1531 aa13.93□□□□□ -0.18
SCLT1-201ENST00000281142 RABEP1Q15276 862 aa13.93□□□□□ -0.18
SCLT1-201ENST00000281142 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
SCLT1-201ENST00000281142 USP26Q9BXU7 913 aa13.93□□□□□ -0.18
SCLT1-201ENST00000281142 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-201ENST00000281142 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 NOL7Q9UMY1 257 aaKnown RBP13.92□□□□□ -0.18
SCLT1-201ENST00000281142 SYCE3A1L190 88 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 PDLIM2Q96JY6 352 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 COL22A1Q8NFW1 1626 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-201ENST00000281142 UQCRHLA0A096LP55 91 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 UQCRHP07919 91 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
SCLT1-201ENST00000281142 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
SCLT1-201ENST00000281142 PEAK1Q9H792 1746 aa13.91□□□□□ -0.18
SCLT1-201ENST00000281142 ABCC4O15439 1325 aa13.91□□□□□ -0.18
SCLT1-201ENST00000281142 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
SCLT1-201ENST00000281142 NUCB2P80303 420 aa13.91□□□□□ -0.18
SCLT1-201ENST00000281142 AATKQ6ZMQ8 1374 aa13.91□□□□□ -0.18
SCLT1-201ENST00000281142 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 GCP02774 474 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 MPNDQ8N594 471 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 HSPA1LP34931 641 aa13.9□□□□□ -0.18
SCLT1-201ENST00000281142 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
SCLT1-201ENST00000281142 FAM83GA6ND36 823 aa13.89□□□□□ -0.19
SCLT1-201ENST00000281142 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-201ENST00000281142 ZNF500O60304 480 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-201ENST00000281142 FCHSD2O94868 740 aa13.89□□□□□ -0.19
SCLT1-201ENST00000281142 SDSP20132 328 aa13.89□□□□□ -0.19
SCLT1-201ENST00000281142 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
SCLT1-201ENST00000281142 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-201ENST00000281142 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
SCLT1-201ENST00000281142 FGD1P98174 961 aa13.88□□□□□ -0.19
SCLT1-201ENST00000281142 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
SCLT1-201ENST00000281142 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
SCLT1-201ENST00000281142 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
SCLT1-201ENST00000281142 KRT24Q2M2I5 525 aa13.87□□□□□ -0.19
SCLT1-201ENST00000281142 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-201ENST00000281142 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-201ENST00000281142 ARHGAP45Q92619 1136 aa13.87□□□□□ -0.19
SCLT1-201ENST00000281142 TERF1P54274 439 aa13.87□□□□□ -0.19
SCLT1-201ENST00000281142 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
SCLT1-201ENST00000281142 DCTPP1Q9H773 170 aa13.87□□□□□ -0.19
SCLT1-201ENST00000281142 RGPD5Q99666 1765 aa13.86□□□□□ -0.19
SCLT1-201ENST00000281142 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
SCLT1-201ENST00000281142 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
SCLT1-201ENST00000281142 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
SCLT1-201ENST00000281142 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
SCLT1-201ENST00000281142 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-201ENST00000281142 INTS3Q68E01 1043 aaKnown RBP13.85□□□□□ -0.19
SCLT1-201ENST00000281142 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-201ENST00000281142 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-201ENST00000281142 TSC1Q92574 1164 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms