RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 SLC4A3P48751 1232 aa25.28■■□□□ 1.64
UBE2F-201ENST00000272930 ADAMTS7Q9UKP4 1686 aa25.28■■□□□ 1.64
UBE2F-201ENST00000272930 PLEKHG5O94827 1062 aa25.27■■□□□ 1.64
UBE2F-201ENST00000272930 SIPA1L3O60292 1781 aaPredicted RBP25.27■■□□□ 1.64
UBE2F-201ENST00000272930 ERBB3P21860 1342 aa25.27■■□□□ 1.64
UBE2F-201ENST00000272930 PXDNLA1KZ92 1463 aa25.27■■□□□ 1.64
UBE2F-201ENST00000272930 HSPA2P54652 639 aa25.27■■□□□ 1.64
UBE2F-201ENST00000272930 NPHP3Q7Z494 1330 aa25.26■■□□□ 1.64
UBE2F-201ENST00000272930 HOXB7P09629 217 aa25.25■■□□□ 1.63
UBE2F-201ENST00000272930 EIF4A1P60842 406 aaKnown RBP25.25■■□□□ 1.63
UBE2F-201ENST00000272930 NBR1Q14596 966 aa25.25■■□□□ 1.63
UBE2F-201ENST00000272930 SLC4A10Q6U841 1118 aa25.25■■□□□ 1.63
UBE2F-201ENST00000272930 STRCQ7RTU9 1775 aa25.25■■□□□ 1.63
UBE2F-201ENST00000272930 TNS3Q68CZ2 1445 aa25.24■■□□□ 1.63
UBE2F-201ENST00000272930 FKBP5Q13451 457 aaPredicted RBP25.24■■□□□ 1.63
UBE2F-201ENST00000272930 ABCC6O95255 1503 aa25.24■■□□□ 1.63
UBE2F-201ENST00000272930 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
UBE2F-201ENST00000272930 ZC3H6P61129 1189 aaKnown RBP25.23■■□□□ 1.63
UBE2F-201ENST00000272930 TEFQ10587 303 aa25.23■■□□□ 1.63
UBE2F-201ENST00000272930 C1orf141Q5JVX7 400 aa25.23■■□□□ 1.63
UBE2F-201ENST00000272930 HDGFL1Q5TGJ6 251 aa25.23■■□□□ 1.63
UBE2F-201ENST00000272930 RNMTO43148 476 aaKnown RBP25.22■■□□□ 1.63
UBE2F-201ENST00000272930 NECTIN2Q92692 538 aa25.22■■□□□ 1.63
UBE2F-201ENST00000272930 MPRIPQ6WCQ1 1025 aa25.22■■□□□ 1.63
UBE2F-201ENST00000272930 CHMP4AQ9BY43 222 aa25.2■■□□□ 1.63
UBE2F-201ENST00000272930 BTBD11A6QL63 1104 aa25.19■■□□□ 1.62
UBE2F-201ENST00000272930 MFAP1P55081 439 aaKnown RBP25.19■■□□□ 1.62
UBE2F-201ENST00000272930 BECN1Q14457 450 aa25.19■■□□□ 1.62
UBE2F-201ENST00000272930 HMMRO75330 724 aa25.19■■□□□ 1.62
UBE2F-201ENST00000272930 C22orf23Q9BZE7 217 aa25.19■■□□□ 1.62
UBE2F-201ENST00000272930 SCN11AQ9UI33 1791 aa25.18■■□□□ 1.62
UBE2F-201ENST00000272930 GNAI2P04899 355 aa25.18■■□□□ 1.62
UBE2F-201ENST00000272930 PLEKHM2Q8IWE5 1019 aa25.18■■□□□ 1.62
UBE2F-201ENST00000272930 SPATA31A3Q5VYP0 1347 aa25.17■■□□□ 1.62
UBE2F-201ENST00000272930 KCNQ3O43525 872 aa25.17■■□□□ 1.62
UBE2F-201ENST00000272930 GNAI3P08754 354 aa25.17■■□□□ 1.62
UBE2F-201ENST00000272930 PLEKHG2Q9H7P9 1386 aa25.16■■□□□ 1.62
UBE2F-201ENST00000272930 HEG1Q9ULI3 1381 aa25.15■■□□□ 1.62
UBE2F-201ENST00000272930 PHAXQ9H814 394 aaKnown RBP25.15■■□□□ 1.62
UBE2F-201ENST00000272930 USP35Q9P2H5 1018 aa25.13■■□□□ 1.61
UBE2F-201ENST00000272930 CPDO75976 1380 aa25.13■■□□□ 1.61
UBE2F-201ENST00000272930 EIF2S2P20042 333 aaKnown RBP25.13■■□□□ 1.61
UBE2F-201ENST00000272930 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
UBE2F-201ENST00000272930 GSPT1P15170 499 aaKnown RBP25.12■■□□□ 1.61
UBE2F-201ENST00000272930 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
UBE2F-201ENST00000272930 CABLES1Q8TDN4 633 aa25.12■■□□□ 1.61
UBE2F-201ENST00000272930 NLRP2Q9NX02 1062 aa25.12■■□□□ 1.61
UBE2F-201ENST00000272930 CHPF2Q9P2E5 772 aa25.12■■□□□ 1.61
UBE2F-201ENST00000272930 PKD1L3Q7Z443 1732 aa25.11■■□□□ 1.61
UBE2F-201ENST00000272930 MEGF6O75095 1541 aa25.11■■□□□ 1.61
UBE2F-201ENST00000272930 RBM25P49756 843 aaKnown RBP25.11■■□□□ 1.61
UBE2F-201ENST00000272930 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
UBE2F-201ENST00000272930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.11■■□□□ 1.61
UBE2F-201ENST00000272930 TTC22Q5TAA0 569 aa25.1■■□□□ 1.61
UBE2F-201ENST00000272930 C16orf71Q8IYS4 520 aaPredicted RBP25.1■■□□□ 1.61
UBE2F-201ENST00000272930 KDM4FA0A1W2PPD8 638 aa25.1■■□□□ 1.61
UBE2F-201ENST00000272930 TBC1D9Q6ZT07 1266 aa25.1■■□□□ 1.61
UBE2F-201ENST00000272930 USP44Q9H0E7 712 aa25.1■■□□□ 1.61
UBE2F-201ENST00000272930 ATP8B2P98198 1209 aa25.09■■□□□ 1.61
UBE2F-201ENST00000272930 GIGYF1O75420 1035 aaPredicted RBP25.08■■□□□ 1.61
UBE2F-201ENST00000272930 TATP17735 454 aaPredicted RBP25.08■■□□□ 1.61
UBE2F-201ENST00000272930 TBC1D2Q9BYX2 928 aa25.08■■□□□ 1.61
UBE2F-201ENST00000272930 KDM6AO15550 1401 aaPredicted RBP25.08■■□□□ 1.61
UBE2F-201ENST00000272930 CDC45O75419 566 aa25.08■■□□□ 1.61
UBE2F-201ENST00000272930 SMARCA5O60264 1052 aaPredicted RBP25.07■■□□□ 1.6
UBE2F-201ENST00000272930 DBF4Q9UBU7 674 aaPredicted RBP25.07■■□□□ 1.6
UBE2F-201ENST00000272930 OTUD7AQ8TE49 926 aaPredicted RBP25.07■■□□□ 1.6
UBE2F-201ENST00000272930 SRCIN1Q9C0H9 1055 aa25.07■■□□□ 1.6
UBE2F-201ENST00000272930 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
UBE2F-201ENST00000272930 PHKG2P15735 406 aa25.05■■□□□ 1.6
UBE2F-201ENST00000272930 CHRNA2Q15822 529 aa25.05■■□□□ 1.6
UBE2F-201ENST00000272930 DNAAF4Q8WXU2 420 aa25.05■■□□□ 1.6
UBE2F-201ENST00000272930 LRRFIP2Q9Y608 721 aaKnown RBP25.05■■□□□ 1.6
UBE2F-201ENST00000272930 PNMA6EA0A0J9YXQ4 647 aa25.05■■□□□ 1.6
UBE2F-201ENST00000272930 UBTFL1P0CB47 393 aaPredicted RBP25.05■■□□□ 1.6
UBE2F-201ENST00000272930 TUBGCP6Q96RT7 1819 aa25.04■■□□□ 1.6
UBE2F-201ENST00000272930 MRC1P22897 1456 aa25.04■■□□□ 1.6
UBE2F-201ENST00000272930 CSB-PGBD3P0DP91 1061 aa25.04■■□□□ 1.6
UBE2F-201ENST00000272930 ADCY9O60503 1353 aa25.04■■□□□ 1.6
UBE2F-201ENST00000272930 PI4KAP2A4QPH2 592 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 APBB1O00213 710 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 BEND3Q5T5X7 828 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 PI4KAP1Q8N8J0 262 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 OSBPL3Q9H4L5 887 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 SOS2Q07890 1332 aaPredicted RBP25.03■■□□□ 1.6
UBE2F-201ENST00000272930 SLC52A2Q9HAB3 445 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 C5P01031 1676 aa25.03■■□□□ 1.6
UBE2F-201ENST00000272930 IBTKQ9P2D0 1353 aaPredicted RBP25.02■■□□□ 1.6
UBE2F-201ENST00000272930 EIF5BO60841 1220 aaKnown RBP25.02■■□□□ 1.6
UBE2F-201ENST00000272930 NFKBIBQ15653 356 aa25.02■■□□□ 1.6
UBE2F-201ENST00000272930 ABCA3Q99758 1704 aa25.02■■□□□ 1.6
UBE2F-201ENST00000272930 ZNF335Q9H4Z2 1342 aaPredicted RBP25.02■■□□□ 1.6
UBE2F-201ENST00000272930 IFNL2Q8IZJ0 200 aa25.02■■□□□ 1.6
UBE2F-201ENST00000272930 EXOC6BQ9Y2D4 811 aa25.02■■□□□ 1.6
UBE2F-201ENST00000272930 PARP4Q9UKK3 1724 aaKnown RBP25.01■■□□□ 1.59
UBE2F-201ENST00000272930 ANXA1P04083 346 aa25.01■■□□□ 1.59
UBE2F-201ENST00000272930 SLAIN2Q9P270 581 aa25■■□□□ 1.59
UBE2F-201ENST00000272930 SALL3Q9BXA9 1300 aa25■■□□□ 1.59
UBE2F-201ENST00000272930 SSH3Q8TE77 659 aa25■■□□□ 1.59
UBE2F-201ENST00000272930 LRRCC1Q9C099 1032 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms