RNA–Protein interactions for RNA: ENST00000266458.9

GABARAPL1-201, Transcript of GABA type A receptor associated protein like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABARAPL1, Length 1,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-201ENST00000266458 PDGFDQ9GZP0 370 aaPredicted RBP22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 SPON1Q9HCB6 807 aa22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 STK32BQ9NY57 414 aa22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
GABARAPL1-201ENST00000266458 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
GABARAPL1-201ENST00000266458 SLC15A2Q16348 729 aa22.39■■□□□ 1.18
GABARAPL1-201ENST00000266458 VIRMAQ69YN4 1812 aaKnown RBP22.39■■□□□ 1.18
GABARAPL1-201ENST00000266458 CT47B1P0C2W7 299 aaPredicted RBP22.39■■□□□ 1.17
GABARAPL1-201ENST00000266458 PRIM1P49642 420 aaKnown RBP22.39■■□□□ 1.17
GABARAPL1-201ENST00000266458 TATP17735 454 aaPredicted RBP22.38■■□□□ 1.17
GABARAPL1-201ENST00000266458 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
GABARAPL1-201ENST00000266458 LAS1LQ9Y4W2 734 aaKnown RBP22.38■■□□□ 1.17
GABARAPL1-201ENST00000266458 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
GABARAPL1-201ENST00000266458 SKAP1Q86WV1 359 aa22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 PPP1R1BQ9UD71 204 aaPredicted RBP22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 BTAF1O14981 1849 aa22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 ZBTB7AO95365 584 aa22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 RARSP54136 660 aaKnown RBP22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 LRRC4BQ9NT99 713 aa22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
GABARAPL1-201ENST00000266458 RGS3P49796 1198 aa22.34■■□□□ 1.17
GABARAPL1-201ENST00000266458 MTHFSP49914 203 aa22.34■■□□□ 1.17
GABARAPL1-201ENST00000266458 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
GABARAPL1-201ENST00000266458 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
GABARAPL1-201ENST00000266458 KCNQ4P56696 695 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 ZNF827Q17R98 1081 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 CASZ1Q86V15 1759 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 IGHDP01880 384 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 SLC27A3Q5K4L6 730 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 EYA1Q99502 592 aa22.3■■□□□ 1.16
GABARAPL1-201ENST00000266458 COG6Q9Y2V7 657 aa22.29■■□□□ 1.16
GABARAPL1-201ENST00000266458 DOT1LQ8TEK3 1739 aa22.29■■□□□ 1.16
GABARAPL1-201ENST00000266458 CYP27B1O15528 508 aa22.28■■□□□ 1.16
GABARAPL1-201ENST00000266458 MAP2P11137 1827 aaKnown RBP22.28■■□□□ 1.16
GABARAPL1-201ENST00000266458 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
GABARAPL1-201ENST00000266458 PTGER2P43116 358 aa22.27■■□□□ 1.15
GABARAPL1-201ENST00000266458 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.15
GABARAPL1-201ENST00000266458 PAPPAQ13219 1627 aa22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 AKT1S1Q96B36 256 aa22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 RWDD1Q9H446 243 aaPredicted RBP22.26■■□□□ 1.15
GABARAPL1-201ENST00000266458 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 NCAPD2Q15021 1401 aa22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 U2AF1L5P0DN76 240 aaPredicted RBP22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 U2AF1Q01081 240 aaKnown RBP eCLIP22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 NFKBIBQ15653 356 aa22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 IL16Q14005 1332 aa22.25■■□□□ 1.15
GABARAPL1-201ENST00000266458 BECN1Q14457 450 aa22.24■■□□□ 1.15
GABARAPL1-201ENST00000266458 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
GABARAPL1-201ENST00000266458 CCNL1Q9UK58 526 aaPredicted RBP22.24■■□□□ 1.15
GABARAPL1-201ENST00000266458 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
GABARAPL1-201ENST00000266458 RRP7AQ9Y3A4 280 aaKnown RBP22.23■■□□□ 1.15
GABARAPL1-201ENST00000266458 UPF2Q9HAU5 1272 aaKnown RBP22.22■■□□□ 1.15
GABARAPL1-201ENST00000266458 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
GABARAPL1-201ENST00000266458 TFCP2L1Q9NZI6 479 aa22.21■■□□□ 1.15
GABARAPL1-201ENST00000266458 COL3A1P02461 1466 aaPredicted RBP22.2■■□□□ 1.15
GABARAPL1-201ENST00000266458 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
GABARAPL1-201ENST00000266458 SGIP1Q9BQI5 828 aa22.19■■□□□ 1.14
GABARAPL1-201ENST00000266458 GSE1Q14687 1217 aa22.19■■□□□ 1.14
GABARAPL1-201ENST00000266458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.19■■□□□ 1.14
GABARAPL1-201ENST00000266458 PNPLA7Q6ZV29 1317 aa22.18■■□□□ 1.14
GABARAPL1-201ENST00000266458 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
GABARAPL1-201ENST00000266458 LY75O60449 1722 aa22.17■■□□□ 1.14
GABARAPL1-201ENST00000266458 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
GABARAPL1-201ENST00000266458 PIGBQ92521 554 aa22.17■■□□□ 1.14
GABARAPL1-201ENST00000266458 IGSF1Q8N6C5 1336 aa22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 PLEKHF1Q96S99 279 aa22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 PALLDQ8WX93 1383 aa22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 PHKG2P15735 406 aa22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 FHDC1Q9C0D6 1143 aaPredicted RBP22.16■■□□□ 1.14
GABARAPL1-201ENST00000266458 UTRNP46939 3433 aa22.15■■□□□ 1.14
GABARAPL1-201ENST00000266458 RLBP1P12271 317 aa22.15■■□□□ 1.14
GABARAPL1-201ENST00000266458 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
GABARAPL1-201ENST00000266458 TMPOP42166 694 aaKnown RBP22.14■■□□□ 1.14
GABARAPL1-201ENST00000266458 SLC4A3P48751 1232 aa22.14■■□□□ 1.14
GABARAPL1-201ENST00000266458 SLC16A10Q8TF71 515 aa22.14■■□□□ 1.14
GABARAPL1-201ENST00000266458 ARXQ96QS3 562 aa22.14■■□□□ 1.14
GABARAPL1-201ENST00000266458 DCAF8L1A6NGE4 600 aa22.14■■□□□ 1.13
GABARAPL1-201ENST00000266458 SYT17Q9BSW7 474 aa22.14■■□□□ 1.13
GABARAPL1-201ENST00000266458 TOGARAM1Q9Y4F4 1720 aa22.13■■□□□ 1.13
GABARAPL1-201ENST00000266458 SMARCC1Q92922 1105 aaPredicted RBP22.13■■□□□ 1.13
GABARAPL1-201ENST00000266458 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
GABARAPL1-201ENST00000266458 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
GABARAPL1-201ENST00000266458 ZNF428Q96B54 188 aa22.12■■□□□ 1.13
GABARAPL1-201ENST00000266458 TMOD3Q9NYL9 352 aa22.12■■□□□ 1.13
GABARAPL1-201ENST00000266458 HDAC1Q13547 482 aaPredicted RBP22.11■■□□□ 1.13
GABARAPL1-201ENST00000266458 AEBP1Q8IUX7 1158 aa22.1■■□□□ 1.13
GABARAPL1-201ENST00000266458 SMC4Q9NTJ3 1288 aa22.1■■□□□ 1.13
GABARAPL1-201ENST00000266458 KIF16BQ96L93 1317 aa22.1■■□□□ 1.13
GABARAPL1-201ENST00000266458 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms