RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CABLES1Q8TDN4 633 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 FAM184AQ8NB25 1140 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
CSPG5-201ENST00000264723 H3BQV1 296 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 IFFO2Q5TF58 517 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 AACSQ86V21 672 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 TMX3Q96JJ7 454 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 USP26Q9BXU7 913 aa23.84■■□□□ 1.41
CSPG5-201ENST00000264723 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-201ENST00000264723 TSPY26PQ9H489 355 aa23.82■■□□□ 1.4
CSPG5-201ENST00000264723 TULP1O00294 542 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-201ENST00000264723 MBD3O95983 291 aa23.82■■□□□ 1.4
CSPG5-201ENST00000264723 ZSCAN23Q3MJ62 389 aa23.82■■□□□ 1.4
CSPG5-201ENST00000264723 SPC24Q8NBT2 197 aa23.82■■□□□ 1.4
CSPG5-201ENST00000264723 KLHL40Q2TBA0 621 aa23.81■■□□□ 1.4
CSPG5-201ENST00000264723 ATP6V1DQ9Y5K8 247 aa23.81■■□□□ 1.4
CSPG5-201ENST00000264723 CEBPZQ03701 1054 aaKnown RBP23.81■■□□□ 1.4
CSPG5-201ENST00000264723 WASHC4Q2M389 1173 aa23.81■■□□□ 1.4
CSPG5-201ENST00000264723 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.81■■□□□ 1.4
CSPG5-201ENST00000264723 PIP4K2AP48426 406 aaPredicted RBP23.8■■□□□ 1.4
CSPG5-201ENST00000264723 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
CSPG5-201ENST00000264723 PPP1R42Q7Z4L9 355 aa23.8■■□□□ 1.4
CSPG5-201ENST00000264723 ZSCAN30Q86W11 494 aa23.8■■□□□ 1.4
CSPG5-201ENST00000264723 ANKRD24Q8TF21 1146 aa23.8■■□□□ 1.4
CSPG5-201ENST00000264723 JAKMIP1Q96N16 626 aaKnown RBP23.8■■□□□ 1.4
CSPG5-201ENST00000264723 SLC39A6Q13433 755 aa23.8■■□□□ 1.4
CSPG5-201ENST00000264723 UNC13BO14795 1591 aa23.8■■□□□ 1.4
CSPG5-201ENST00000264723 DNAAF4Q8WXU2 420 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 MSH6P52701 1360 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 CASTP20810 708 aaKnown RBP23.79■■□□□ 1.4
CSPG5-201ENST00000264723 MCM2P49736 904 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 CCDC83Q8IWF9 413 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 RNF20Q5VTR2 975 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 BICD2Q8TD16 824 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 PTPRCP08575 1304 aa23.79■■□□□ 1.4
CSPG5-201ENST00000264723 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
CSPG5-201ENST00000264723 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
CSPG5-201ENST00000264723 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
CSPG5-201ENST00000264723 METP08581 1390 aa23.78■■□□□ 1.4
CSPG5-201ENST00000264723 ZFYVE16Q7Z3T8 1539 aa23.78■■□□□ 1.4
CSPG5-201ENST00000264723 KAT6BQ8WYB5 2073 aa23.77■■□□□ 1.4
CSPG5-201ENST00000264723 NEO1Q92859 1461 aa23.77■■□□□ 1.4
CSPG5-201ENST00000264723 HSPA2P54652 639 aa23.77■■□□□ 1.4
CSPG5-201ENST00000264723 MADDQ8WXG6 1647 aa23.77■■□□□ 1.4
CSPG5-201ENST00000264723 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
CSPG5-201ENST00000264723 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
CSPG5-201ENST00000264723 TCEANC2Q96MN5 208 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 ORAI2Q96SN7 254 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 TBX22Q9Y458 520 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 KDM4AO75164 1064 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 CLCN1P35523 988 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 SF3A1Q15459 793 aaKnown RBP23.76■■□□□ 1.39
CSPG5-201ENST00000264723 CCDC8Q9H0W5 538 aaPredicted RBP23.76■■□□□ 1.39
CSPG5-201ENST00000264723 CPA1P15085 419 aa23.76■■□□□ 1.39
CSPG5-201ENST00000264723 PPFIA3O75145 1194 aa23.75■■□□□ 1.39
CSPG5-201ENST00000264723 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.75■■□□□ 1.39
CSPG5-201ENST00000264723 PNMA6EA0A0J9YXQ4 647 aa23.75■■□□□ 1.39
CSPG5-201ENST00000264723 CSPP1Q1MSJ5 1256 aa23.75■■□□□ 1.39
CSPG5-201ENST00000264723 MYD88Q99836 296 aa23.75■■□□□ 1.39
CSPG5-201ENST00000264723 WDR33Q9C0J8 1336 aaKnown RBP23.75■■□□□ 1.39
CSPG5-201ENST00000264723 AMOTQ4VCS5 1084 aa23.74■■□□□ 1.39
CSPG5-201ENST00000264723 ESYT1Q9BSJ8 1104 aa23.74■■□□□ 1.39
CSPG5-201ENST00000264723 BOLA2Q9H3K6 86 aa23.74■■□□□ 1.39
CSPG5-201ENST00000264723 PLXNC1O60486 1568 aa23.74■■□□□ 1.39
CSPG5-201ENST00000264723 ATP5J2-PTCD1G3V325 749 aa23.74■■□□□ 1.39
CSPG5-201ENST00000264723 DBF4Q9UBU7 674 aaPredicted RBP23.74■■□□□ 1.39
CSPG5-201ENST00000264723 E9PCH4 1651 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 MYOM2P54296 1465 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 CHL1O00533 1208 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 ZNF592Q92610 1267 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 CCDC39Q9UFE4 941 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 MAP3K2Q9Y2U5 619 aa23.73■■□□□ 1.39
CSPG5-201ENST00000264723 ZNF830Q96NB3 372 aaPredicted RBP23.73■■□□□ 1.39
CSPG5-201ENST00000264723 KIF1BPQ96EK5 621 aa23.72■■□□□ 1.39
CSPG5-201ENST00000264723 FLT4P35916 1363 aa23.72■■□□□ 1.39
CSPG5-201ENST00000264723 USP25Q9UHP3 1055 aa23.72■■□□□ 1.39
CSPG5-201ENST00000264723 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
CSPG5-201ENST00000264723 CAMK4Q16566 473 aa23.71■■□□□ 1.39
CSPG5-201ENST00000264723 HTATSF1O43719 755 aaKnown RBP23.71■■□□□ 1.39
CSPG5-201ENST00000264723 CYP46A1Q9Y6A2 500 aa23.71■■□□□ 1.39
CSPG5-201ENST00000264723 GCP02774 474 aa23.71■■□□□ 1.39
CSPG5-201ENST00000264723 HOXC9P31274 260 aa23.71■■□□□ 1.39
CSPG5-201ENST00000264723 PDRG1Q9NUG6 133 aa23.7■■□□□ 1.39
CSPG5-201ENST00000264723 ERC1Q8IUD2 1116 aa23.7■■□□□ 1.38
CSPG5-201ENST00000264723 ABCC4O15439 1325 aa23.7■■□□□ 1.38
CSPG5-201ENST00000264723 LARP1BQ659C4 914 aaKnown RBP23.7■■□□□ 1.38
CSPG5-201ENST00000264723 PA2G4Q9UQ80 394 aaKnown RBP23.69■■□□□ 1.38
CSPG5-201ENST00000264723 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
CSPG5-201ENST00000264723 TMEM2Q9UHN6 1383 aa23.69■■□□□ 1.38
CSPG5-201ENST00000264723 NECAB1Q8N987 351 aa23.69■■□□□ 1.38
CSPG5-201ENST00000264723 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
CSPG5-201ENST00000264723 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
CSPG5-201ENST00000264723 CPLX1O14810 134 aa23.68■■□□□ 1.38
CSPG5-201ENST00000264723 EDC4Q6P2E9 1401 aaKnown RBP23.68■■□□□ 1.38
CSPG5-201ENST00000264723 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
CSPG5-201ENST00000264723 DDX11Q96FC9 970 aa23.67■■□□□ 1.38
CSPG5-201ENST00000264723 ZBTB3Q9H5J0 574 aa23.67■■□□□ 1.38
CSPG5-201ENST00000264723 MAP3K4Q9Y6R4 1608 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms