RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 GAPVD1Q14C86 1478 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 GRM1Q13255 1194 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
USP13-201ENST00000263966 PPP4R3BQ5MIZ7 849 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 CLEC11AQ9Y240 323 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 BEGAINQ9BUH8 593 aa19.18■□□□□ 0.66
USP13-201ENST00000263966 SETD1BQ9UPS6 1966 aaKnown RBP19.18■□□□□ 0.66
USP13-201ENST00000263966 TAF12Q16514 161 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 CTCFLQ8NI51 663 aaPredicted RBP19.17■□□□□ 0.66
USP13-201ENST00000263966 GCC1Q96CN9 775 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 FIBPO43427 364 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 AACSQ86V21 672 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 CABP5Q9NP86 173 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 SAMM50Q9Y512 469 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 MACROD2A1Z1Q3 448 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 WDR33Q9C0J8 1336 aaKnown RBP19.17■□□□□ 0.66
USP13-201ENST00000263966 STK3Q13188 491 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 USP37Q86T82 979 aa19.17■□□□□ 0.66
USP13-201ENST00000263966 SYNCQ9H7C4 482 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 CCDC113Q9H0I3 377 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 FAM193AP78312 1265 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 CBX1P83916 185 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 TRAF1Q13077 416 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 IKBKGQ9Y6K9 419 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 SLC5A1P13866 664 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 TAF3Q5VWG9 929 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
USP13-201ENST00000263966 MAP3K12Q12852 859 aa19.15■□□□□ 0.66
USP13-201ENST00000263966 NAPBQ9H115 298 aa19.15■□□□□ 0.66
USP13-201ENST00000263966 GOPCQ9HD26 462 aa19.15■□□□□ 0.66
USP13-201ENST00000263966 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
USP13-201ENST00000263966 BAG3O95817 575 aa19.15■□□□□ 0.66
USP13-201ENST00000263966 SMC1AQ14683 1233 aaKnown RBP19.15■□□□□ 0.66
USP13-201ENST00000263966 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
USP13-201ENST00000263966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.15■□□□□ 0.66
USP13-201ENST00000263966 ARHGAP29Q52LW3 1261 aa19.15■□□□□ 0.66
USP13-201ENST00000263966 NOC2LQ9Y3T9 749 aaKnown RBP19.15■□□□□ 0.66
USP13-201ENST00000263966 PRC1O43663 620 aa19.14■□□□□ 0.66
USP13-201ENST00000263966 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.66
USP13-201ENST00000263966 LARP1BQ659C4 914 aaKnown RBP19.14■□□□□ 0.66
USP13-201ENST00000263966 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 ARL1P40616 181 aaPredicted RBP19.14■□□□□ 0.65
USP13-201ENST00000263966 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 IFFO1Q0D2I5 559 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 CCDC174Q6PII3 467 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 FSD2A1L4K1 749 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 ODF2LQ9ULJ1 636 aa19.14■□□□□ 0.65
USP13-201ENST00000263966 RNF41Q9H4P4 317 aaPredicted RBP19.14■□□□□ 0.65
USP13-201ENST00000263966 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
USP13-201ENST00000263966 TTC12Q9H892 705 aaPredicted RBP19.13■□□□□ 0.65
USP13-201ENST00000263966 SPTY2D1Q68D10 685 aaPredicted RBP19.13■□□□□ 0.65
USP13-201ENST00000263966 AMPD3Q01432 767 aa19.13■□□□□ 0.65
USP13-201ENST00000263966 BICD1Q96G01 975 aa19.13■□□□□ 0.65
USP13-201ENST00000263966 CCDC178Q5BJE1 867 aa19.13■□□□□ 0.65
USP13-201ENST00000263966 CRACR2AQ9BSW2 395 aa19.13■□□□□ 0.65
USP13-201ENST00000263966 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 CCDC172P0C7W6 258 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 PRPF31Q8WWY3 499 aaKnown RBP19.12■□□□□ 0.65
USP13-201ENST00000263966 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 CKAP2LQ8IYA6 745 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 SPATA32Q96LK8 384 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 KIF5BP33176 963 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 FAM177A1Q8N128 213 aaPredicted RBP19.12■□□□□ 0.65
USP13-201ENST00000263966 OGFOD1Q8N543 542 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 PLVAPQ9BX97 442 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 APBB1IPQ7Z5R6 666 aaPredicted RBP19.12■□□□□ 0.65
USP13-201ENST00000263966 GBP3Q9H0R5 595 aa19.12■□□□□ 0.65
USP13-201ENST00000263966 KIF21BO75037 1637 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
USP13-201ENST00000263966 CALML4Q96GE6 196 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 HDAC9Q9UKV0 1011 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 LIG1P18858 919 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 PUF60Q9UHX1 559 aaKnown RBP19.11■□□□□ 0.65
USP13-201ENST00000263966 UBE4AQ14139 1066 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.11■□□□□ 0.65
USP13-201ENST00000263966 C6orf229H3BNL8 230 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 CCDC14Q49A88 953 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 TTC16Q8NEE8 873 aa19.11■□□□□ 0.65
USP13-201ENST00000263966 IFIT5Q13325 482 aaKnown RBP19.1■□□□□ 0.65
USP13-201ENST00000263966 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
USP13-201ENST00000263966 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
USP13-201ENST00000263966 BIN2Q9UBW5 565 aaPredicted RBP19.1■□□□□ 0.65
USP13-201ENST00000263966 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
USP13-201ENST00000263966 PPP1R14CQ8TAE6 165 aa19.1■□□□□ 0.65
USP13-201ENST00000263966 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
USP13-201ENST00000263966 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.1■□□□□ 0.65
USP13-201ENST00000263966 V9GYY5 206 aaPredicted RBP19.1■□□□□ 0.65
USP13-201ENST00000263966 RFC4P35249 363 aa19.1■□□□□ 0.65
USP13-201ENST00000263966 UPF3BQ9BZI7 483 aaKnown RBP19.09■□□□□ 0.65
USP13-201ENST00000263966 SNX16P57768 344 aa19.09■□□□□ 0.65
USP13-201ENST00000263966 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
USP13-201ENST00000263966 RNF214Q8ND24 703 aa19.09■□□□□ 0.65
USP13-201ENST00000263966 PYM1Q9BRP8 204 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms