RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 MS4A1P11836 297 aa30.59■■■□□ 2.49
EPCAM-201ENST00000263735 USP35Q9P2H5 1018 aa30.58■■■□□ 2.49
EPCAM-201ENST00000263735 BTBD11A6QL63 1104 aa30.57■■■□□ 2.48
EPCAM-201ENST00000263735 IPO8O15397 1037 aaKnown RBP30.56■■■□□ 2.48
EPCAM-201ENST00000263735 MRPL50Q8N5N7 158 aaKnown RBP30.56■■■□□ 2.48
EPCAM-201ENST00000263735 TOGARAM1Q9Y4F4 1720 aa30.56■■■□□ 2.48
EPCAM-201ENST00000263735 ATF7IPQ6VMQ6 1270 aa30.55■■■□□ 2.48
EPCAM-201ENST00000263735 SLC52A2Q9HAB3 445 aa30.55■■■□□ 2.48
EPCAM-201ENST00000263735 NOB1Q9ULX3 412 aaKnown RBP30.55■■■□□ 2.48
EPCAM-201ENST00000263735 LRP6O75581 1613 aa30.54■■■□□ 2.48
EPCAM-201ENST00000263735 ITGB4P16144 1822 aa30.53■■■□□ 2.48
EPCAM-201ENST00000263735 THRAP3Q9Y2W1 955 aaKnown RBP30.53■■■□□ 2.48
EPCAM-201ENST00000263735 TRIM27P14373 513 aa30.52■■■□□ 2.48
EPCAM-201ENST00000263735 PANK1Q8TE04 598 aa30.52■■■□□ 2.48
EPCAM-201ENST00000263735 ARHGAP45Q92619 1136 aa30.52■■■□□ 2.48
EPCAM-201ENST00000263735 PAPPAQ13219 1627 aa30.52■■■□□ 2.48
EPCAM-201ENST00000263735 SPATA31A1Q5TZJ5 1347 aa30.51■■■□□ 2.48
EPCAM-201ENST00000263735 HSPA1LP34931 641 aa30.51■■■□□ 2.47
EPCAM-201ENST00000263735 EIF4A1P60842 406 aaKnown RBP30.51■■■□□ 2.47
EPCAM-201ENST00000263735 NKX1-1Q15270 411 aaPredicted RBP30.51■■■□□ 2.47
EPCAM-201ENST00000263735 DZIP1LQ8IYY4 767 aaKnown RBP30.51■■■□□ 2.47
EPCAM-201ENST00000263735 UBR2Q8IWV8 1755 aa30.51■■■□□ 2.47
EPCAM-201ENST00000263735 FTSJ3Q8IY81 847 aaKnown RBP30.5■■■□□ 2.47
EPCAM-201ENST00000263735 HOXB7P09629 217 aa30.5■■■□□ 2.47
EPCAM-201ENST00000263735 B4GALNT3Q6L9W6 998 aa30.5■■■□□ 2.47
EPCAM-201ENST00000263735 CCDC136Q96JN2 1154 aa30.5■■■□□ 2.47
EPCAM-201ENST00000263735 CDCA7Q9BWT1 371 aaPredicted RBP30.49■■■□□ 2.47
EPCAM-201ENST00000263735 TNNQ9UQP3 1299 aa30.49■■■□□ 2.47
EPCAM-201ENST00000263735 C5P01031 1676 aa30.49■■■□□ 2.47
EPCAM-201ENST00000263735 TNS2Q63HR2 1409 aa30.49■■■□□ 2.47
EPCAM-201ENST00000263735 RLBP1P12271 317 aa30.48■■■□□ 2.47
EPCAM-201ENST00000263735 SPATA31A5Q5VU36 1347 aa30.48■■■□□ 2.47
EPCAM-201ENST00000263735 SPATA31A7Q8IWB4 1347 aa30.48■■■□□ 2.47
EPCAM-201ENST00000263735 TCERG1O14776 1098 aaKnown RBP30.47■■■□□ 2.47
EPCAM-201ENST00000263735 CLUAP1Q96AJ1 413 aa30.47■■■□□ 2.47
EPCAM-201ENST00000263735 COG6Q9Y2V7 657 aa30.47■■■□□ 2.47
EPCAM-201ENST00000263735 LAMB4A4D0S4 1761 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 BCL9LQ86UU0 1499 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 UNC5CLQ8IV45 518 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 NFATC2IPQ8NCF5 419 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 CHMP4AQ9BY43 222 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 N4BP2Q86UW6 1770 aaPredicted RBP30.46■■■□□ 2.47
EPCAM-201ENST00000263735 HEG1Q9ULI3 1381 aa30.46■■■□□ 2.47
EPCAM-201ENST00000263735 CCDC30Q5VVM6 783 aa30.45■■■□□ 2.47
EPCAM-201ENST00000263735 C8orf37Q96NL8 207 aa30.45■■■□□ 2.47
EPCAM-201ENST00000263735 ERVV-2B6SEH9 535 aa30.44■■■□□ 2.46
EPCAM-201ENST00000263735 KCNQ3O43525 872 aa30.44■■■□□ 2.46
EPCAM-201ENST00000263735 AAMPQ13685 434 aa30.44■■■□□ 2.46
EPCAM-201ENST00000263735 DDX54Q8TDD1 881 aaKnown RBP30.44■■■□□ 2.46
EPCAM-201ENST00000263735 NGLY1Q96IV0 654 aa30.44■■■□□ 2.46
EPCAM-201ENST00000263735 MVPQ14764 893 aaKnown RBP30.44■■■□□ 2.46
EPCAM-201ENST00000263735 CABP4P57796 275 aa30.43■■■□□ 2.46
EPCAM-201ENST00000263735 FNBP4Q8N3X1 1017 aaPredicted RBP30.43■■■□□ 2.46
EPCAM-201ENST00000263735 STK31Q9BXU1 1019 aa30.43■■■□□ 2.46
EPCAM-201ENST00000263735 KAT6BQ8WYB5 2073 aa30.43■■■□□ 2.46
EPCAM-201ENST00000263735 ZNF790Q6PG37 636 aa30.42■■■□□ 2.46
EPCAM-201ENST00000263735 DOT1LQ8TEK3 1739 aa30.42■■■□□ 2.46
EPCAM-201ENST00000263735 API5Q9BZZ5 524 aaKnown RBP30.42■■■□□ 2.46
EPCAM-201ENST00000263735 PTPRCP08575 1304 aa30.41■■■□□ 2.46
EPCAM-201ENST00000263735 GLI3P10071 1580 aa30.4■■■□□ 2.46
EPCAM-201ENST00000263735 EXOC5O00471 708 aa30.4■■■□□ 2.46
EPCAM-201ENST00000263735 SLC4A2P04920 1241 aa30.4■■■□□ 2.46
EPCAM-201ENST00000263735 BARGINQ6ZT62 677 aa30.4■■■□□ 2.46
EPCAM-201ENST00000263735 HDGFL1Q5TGJ6 251 aa30.39■■■□□ 2.46
EPCAM-201ENST00000263735 ABCC4O15439 1325 aa30.39■■■□□ 2.46
EPCAM-201ENST00000263735 VPS72Q15906 364 aa30.39■■■□□ 2.45
EPCAM-201ENST00000263735 DDX19BQ9UMR2 479 aa30.38■■■□□ 2.45
EPCAM-201ENST00000263735 CCDC9Q9Y3X0 531 aaKnown RBP30.38■■■□□ 2.45
EPCAM-201ENST00000263735 RGS12O14924 1447 aa30.37■■■□□ 2.45
EPCAM-201ENST00000263735 GIGYF1O75420 1035 aaPredicted RBP30.36■■■□□ 2.45
EPCAM-201ENST00000263735 TTC5Q8N0Z6 440 aa30.36■■■□□ 2.45
EPCAM-201ENST00000263735 TMEM57Q8N5G2 664 aa30.36■■■□□ 2.45
EPCAM-201ENST00000263735 SLC39A6Q13433 755 aa30.36■■■□□ 2.45
EPCAM-201ENST00000263735 ITPRIPQ8IWB1 547 aa30.35■■■□□ 2.45
EPCAM-201ENST00000263735 PELP1Q8IZL8 1130 aaKnown RBP30.34■■■□□ 2.45
EPCAM-201ENST00000263735 DDB1Q16531 1140 aa30.33■■■□□ 2.45
EPCAM-201ENST00000263735 MEX3CQ5U5Q3 659 aaKnown RBP30.33■■■□□ 2.45
EPCAM-201ENST00000263735 USP21Q9UK80 565 aa30.33■■■□□ 2.45
EPCAM-201ENST00000263735 THSD7AQ9UPZ6 1657 aa30.33■■■□□ 2.45
EPCAM-201ENST00000263735 NECTIN2Q92692 538 aa30.32■■■□□ 2.44
EPCAM-201ENST00000263735 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
EPCAM-201ENST00000263735 EIF2S2P20042 333 aaKnown RBP30.31■■■□□ 2.44
EPCAM-201ENST00000263735 FMNL2Q96PY5 1086 aa30.3■■■□□ 2.44
EPCAM-201ENST00000263735 G2E3Q7L622 706 aa30.3■■■□□ 2.44
EPCAM-201ENST00000263735 FLIIQ13045 1269 aa30.29■■■□□ 2.44
EPCAM-201ENST00000263735 ZNF496Q96IT1 587 aaPredicted RBP30.29■■■□□ 2.44
EPCAM-201ENST00000263735 CHMP4BQ9H444 224 aaKnown RBP30.29■■■□□ 2.44
EPCAM-201ENST00000263735 TMOD3Q9NYL9 352 aa30.29■■■□□ 2.44
EPCAM-201ENST00000263735 PXDNLA1KZ92 1463 aa30.28■■■□□ 2.44
EPCAM-201ENST00000263735 DBF4Q9UBU7 674 aaPredicted RBP30.27■■■□□ 2.44
EPCAM-201ENST00000263735 CHPF2Q9P2E5 772 aa30.27■■■□□ 2.44
EPCAM-201ENST00000263735 SNRPA1P09661 255 aaKnown RBP30.26■■■□□ 2.43
EPCAM-201ENST00000263735 INTS3Q68E01 1043 aaKnown RBP30.26■■■□□ 2.43
EPCAM-201ENST00000263735 BCL9O00512 1426 aa30.24■■■□□ 2.43
EPCAM-201ENST00000263735 AFF2P51816 1311 aa30.24■■■□□ 2.43
EPCAM-201ENST00000263735 PRAMEF22A3QJZ6 481 aa30.24■■■□□ 2.43
EPCAM-201ENST00000263735 FKBP5Q13451 457 aaPredicted RBP30.23■■■□□ 2.43
EPCAM-201ENST00000263735 FAM98CQ17RN3 349 aaKnown RBP30.23■■■□□ 2.43
EPCAM-201ENST00000263735 KDM2BQ8NHM5 1336 aa30.23■■■□□ 2.43
EPCAM-201ENST00000263735 ZBTB40Q9NUA8 1239 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms