RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 CCDC30Q5VVM6 783 aa19.88■□□□□ 0.77
FOXRED1-201ENST00000263578 HDAC1Q13547 482 aaPredicted RBP19.88■□□□□ 0.77
FOXRED1-201ENST00000263578 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
FOXRED1-201ENST00000263578 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
FOXRED1-201ENST00000263578 COL22A1Q8NFW1 1626 aaPredicted RBP19.86■□□□□ 0.77
FOXRED1-201ENST00000263578 EIF4A1P60842 406 aaKnown RBP19.86■□□□□ 0.77
FOXRED1-201ENST00000263578 INTS3Q68E01 1043 aaKnown RBP19.86■□□□□ 0.77
FOXRED1-201ENST00000263578 KDM6AO15550 1401 aaPredicted RBP19.85■□□□□ 0.77
FOXRED1-201ENST00000263578 HOXB7P09629 217 aa19.85■□□□□ 0.77
FOXRED1-201ENST00000263578 PHKG2P15735 406 aa19.85■□□□□ 0.77
FOXRED1-201ENST00000263578 RGS3P49796 1198 aa19.84■□□□□ 0.77
FOXRED1-201ENST00000263578 TOM1L2Q6ZVM7 507 aa19.84■□□□□ 0.77
FOXRED1-201ENST00000263578 N4BP2Q86UW6 1770 aaPredicted RBP19.83■□□□□ 0.77
FOXRED1-201ENST00000263578 HDGFL1Q5TGJ6 251 aa19.83■□□□□ 0.77
FOXRED1-201ENST00000263578 G2E3Q7L622 706 aa19.83■□□□□ 0.77
FOXRED1-201ENST00000263578 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.77
FOXRED1-201ENST00000263578 MRC1P22897 1456 aa19.83■□□□□ 0.76
FOXRED1-201ENST00000263578 KCNQ3O43525 872 aa19.82■□□□□ 0.76
FOXRED1-201ENST00000263578 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
FOXRED1-201ENST00000263578 COL14A1Q05707 1796 aaKnown RBP19.81■□□□□ 0.76
FOXRED1-201ENST00000263578 PDE4AP27815 886 aa19.81■□□□□ 0.76
FOXRED1-201ENST00000263578 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
FOXRED1-201ENST00000263578 FLIIQ13045 1269 aa19.81■□□□□ 0.76
FOXRED1-201ENST00000263578 PHLPP1O60346 1717 aa19.8■□□□□ 0.76
FOXRED1-201ENST00000263578 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
FOXRED1-201ENST00000263578 PDZRN3Q9UPQ7 1066 aa19.8■□□□□ 0.76
FOXRED1-201ENST00000263578 CYP27B1O15528 508 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 HSP90AB1P08238 724 aaKnown RBP19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 SLC52A2Q9HAB3 445 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 STRN4Q9NRL3 753 aa19.79■□□□□ 0.76
FOXRED1-201ENST00000263578 COL16A1Q07092 1604 aaPredicted RBP19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 PXDNLA1KZ92 1463 aa19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 FKBP5Q13451 457 aaPredicted RBP19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 SHANK3Q9BYB0 1731 aa19.78■□□□□ 0.76
FOXRED1-201ENST00000263578 CCT4P50991 539 aaKnown RBP19.77■□□□□ 0.76
FOXRED1-201ENST00000263578 EVA1CP58658 441 aa19.77■□□□□ 0.76
FOXRED1-201ENST00000263578 LARP1Q6PKG0 1096 aaKnown RBP19.77■□□□□ 0.75
FOXRED1-201ENST00000263578 PCDH11XQ9BZA7 1347 aa19.77■□□□□ 0.75
FOXRED1-201ENST00000263578 PCDH11YQ9BZA8 1340 aa19.77■□□□□ 0.75
FOXRED1-201ENST00000263578 F6X3S4 739 aa19.76■□□□□ 0.75
FOXRED1-201ENST00000263578 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
FOXRED1-201ENST00000263578 IL2RBP14784 551 aa19.75■□□□□ 0.75
FOXRED1-201ENST00000263578 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
FOXRED1-201ENST00000263578 GIGYF1O75420 1035 aaPredicted RBP19.75■□□□□ 0.75
FOXRED1-201ENST00000263578 ZCRB1Q8TBF4 217 aaKnown RBP19.75■□□□□ 0.75
FOXRED1-201ENST00000263578 C5P01031 1676 aa19.74■□□□□ 0.75
FOXRED1-201ENST00000263578 ATP10DQ9P241 1426 aa19.74■□□□□ 0.75
FOXRED1-201ENST00000263578 CHPF2Q9P2E5 772 aa19.74■□□□□ 0.75
FOXRED1-201ENST00000263578 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
FOXRED1-201ENST00000263578 ZNF790Q6PG37 636 aa19.74■□□□□ 0.75
FOXRED1-201ENST00000263578 NFATC2IPQ8NCF5 419 aa19.73■□□□□ 0.75
FOXRED1-201ENST00000263578 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
FOXRED1-201ENST00000263578 SIRT2Q8IXJ6 389 aa19.72■□□□□ 0.75
FOXRED1-201ENST00000263578 MEIS3Q99687 375 aa19.72■□□□□ 0.75
FOXRED1-201ENST00000263578 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
FOXRED1-201ENST00000263578 PHAXQ9H814 394 aaKnown RBP19.72■□□□□ 0.75
FOXRED1-201ENST00000263578 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
FOXRED1-201ENST00000263578 DBF4Q9UBU7 674 aaPredicted RBP19.71■□□□□ 0.75
FOXRED1-201ENST00000263578 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
FOXRED1-201ENST00000263578 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
FOXRED1-201ENST00000263578 TOM1O60784 492 aa19.7■□□□□ 0.74
FOXRED1-201ENST00000263578 CABP4P57796 275 aa19.7■□□□□ 0.74
FOXRED1-201ENST00000263578 NUCB1Q02818 461 aa19.7■□□□□ 0.74
FOXRED1-201ENST00000263578 ANKRD44Q8N8A2 993 aa19.69■□□□□ 0.74
FOXRED1-201ENST00000263578 WNK3Q9BYP7 1800 aa19.69■□□□□ 0.74
FOXRED1-201ENST00000263578 RPAP2Q8IXW5 612 aaPredicted RBP19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 LAMB4A4D0S4 1761 aa19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
FOXRED1-201ENST00000263578 PAPPAQ13219 1627 aa19.67■□□□□ 0.74
FOXRED1-201ENST00000263578 GLI3P10071 1580 aa19.67■□□□□ 0.74
FOXRED1-201ENST00000263578 UBR2Q8IWV8 1755 aa19.67■□□□□ 0.74
FOXRED1-201ENST00000263578 ANXA1P04083 346 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 NRAPQ86VF7 1730 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 GNAI3P08754 354 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 CHD1LQ86WJ1 897 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 ZNF496Q96IT1 587 aaPredicted RBP19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 DISP2A7MBM2 1401 aa19.66■□□□□ 0.74
FOXRED1-201ENST00000263578 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
FOXRED1-201ENST00000263578 PIP4K2BP78356 416 aa19.65■□□□□ 0.74
FOXRED1-201ENST00000263578 HYPKQ9NX55 129 aa19.65■□□□□ 0.74
FOXRED1-201ENST00000263578 ADCY9O60503 1353 aa19.65■□□□□ 0.74
FOXRED1-201ENST00000263578 GNAI2P04899 355 aa19.64■□□□□ 0.74
FOXRED1-201ENST00000263578 ANP32AP39687 249 aaKnown RBP19.64■□□□□ 0.74
FOXRED1-201ENST00000263578 PROSER3Q2NL68 480 aa19.64■□□□□ 0.74
FOXRED1-201ENST00000263578 DDX54Q8TDD1 881 aaKnown RBP19.64■□□□□ 0.74
FOXRED1-201ENST00000263578 FMNL2Q96PY5 1086 aa19.64■□□□□ 0.74
FOXRED1-201ENST00000263578 DNAAF4Q8WXU2 420 aa19.64■□□□□ 0.73
FOXRED1-201ENST00000263578 LNPKQ9C0E8 428 aa19.64■□□□□ 0.73
FOXRED1-201ENST00000263578 DDX21Q9NR30 783 aaKnown RBP eCLIP19.64■□□□□ 0.733e-6■■■■■ 35.5
FOXRED1-201ENST00000263578 PI4KAP2A4QPH2 592 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms