RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.31
SCARF1-201ENST00000263071 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
SCARF1-201ENST00000263071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCARF1-201ENST00000263071 RSPH14Q9UHP6 348 aa17.01■□□□□ 0.31
SCARF1-201ENST00000263071 LAMC1P11047 1609 aa17.01■□□□□ 0.31
SCARF1-201ENST00000263071 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 SPHKAPQ2M3C7 1700 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 PRR29P0C7W0 189 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 AK9Q5TCS8 1911 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
SCARF1-201ENST00000263071 TERF2Q15554 542 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 CEP152O94986 1710 aa17■□□□□ 0.31
SCARF1-201ENST00000263071 NUTM1Q86Y26 1132 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 TULP2O00295 520 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 NUCB2P80303 420 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 EP400NLQ6ZTU2 488 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
SCARF1-201ENST00000263071 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
SCARF1-201ENST00000263071 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
SCARF1-201ENST00000263071 RPGRIP1LQ68CZ1 1315 aa16.98■□□□□ 0.31
SCARF1-201ENST00000263071 FEZ2Q9UHY8 353 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-201ENST00000263071 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-201ENST00000263071 GPATCH11Q8N954 259 aa16.98■□□□□ 0.31
SCARF1-201ENST00000263071 REC8O95072 547 aa16.97■□□□□ 0.31
SCARF1-201ENST00000263071 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
SCARF1-201ENST00000263071 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
SCARF1-201ENST00000263071 IL16Q14005 1332 aa16.97■□□□□ 0.31
SCARF1-201ENST00000263071 CEP85Q6P2H3 762 aa16.96■□□□□ 0.31
SCARF1-201ENST00000263071 RIOK3O14730 519 aaKnown RBP16.96■□□□□ 0.31
SCARF1-201ENST00000263071 MYCBPQ99417 103 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-201ENST00000263071 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
SCARF1-201ENST00000263071 CCDC9Q9Y3X0 531 aaKnown RBP16.96■□□□□ 0.31
SCARF1-201ENST00000263071 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.3
SCARF1-201ENST00000263071 ERC2O15083 957 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 IL13P35225 146 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 CPA1P15085 419 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 AMPHP49418 695 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 GPT2Q8TD30 523 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 ANXA1P04083 346 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 LMBRD1Q9NUN5 540 aa16.95■□□□□ 0.3
SCARF1-201ENST00000263071 KRT222Q8N1A0 295 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 RBM33Q96EV2 1170 aaKnown RBP16.94■□□□□ 0.3
SCARF1-201ENST00000263071 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 MSH6P52701 1360 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 FIBPO43427 364 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 HMMRO75330 724 aa16.94■□□□□ 0.3
SCARF1-201ENST00000263071 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
SCARF1-201ENST00000263071 NSD2O96028 1365 aa16.93■□□□□ 0.3
SCARF1-201ENST00000263071 GOLGA6L6A8MZA4 724 aa16.93■□□□□ 0.3
SCARF1-201ENST00000263071 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-201ENST00000263071 DDIT3P35638 169 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
SCARF1-201ENST00000263071 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 ANKRD7Q92527 254 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 RASSF4Q9H2L5 321 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 MYOM2P54296 1465 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-201ENST00000263071 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
SCARF1-201ENST00000263071 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
SCARF1-201ENST00000263071 GADD45BO75293 160 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-201ENST00000263071 MCCP23508 829 aa16.91■□□□□ 0.3
SCARF1-201ENST00000263071 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
SCARF1-201ENST00000263071 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
SCARF1-201ENST00000263071 SURF6O75683 361 aaKnown RBP16.9■□□□□ 0.3
SCARF1-201ENST00000263071 PDE1AP54750 535 aa16.9■□□□□ 0.3
SCARF1-201ENST00000263071 TET3O43151 1660 aa16.9■□□□□ 0.3
SCARF1-201ENST00000263071 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
SCARF1-201ENST00000263071 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-201ENST00000263071 HNRNPH2P55795 449 aaKnown RBP16.9■□□□□ 0.3
SCARF1-201ENST00000263071 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
SCARF1-201ENST00000263071 ABCC4O15439 1325 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 LRSAM1Q6UWE0 723 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 SPC24Q8NBT2 197 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 USP25Q9UHP3 1055 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 DDX41Q9UJV9 622 aaKnown RBP16.89■□□□□ 0.29
SCARF1-201ENST00000263071 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
SCARF1-201ENST00000263071 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
SCARF1-201ENST00000263071 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
SCARF1-201ENST00000263071 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
SCARF1-201ENST00000263071 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
SCARF1-201ENST00000263071 KIF1BO60333 1816 aa16.88■□□□□ 0.29
SCARF1-201ENST00000263071 UHRF1BP1LA0JNW5 1464 aa16.88■□□□□ 0.29
SCARF1-201ENST00000263071 PPRC1Q5VV67 1664 aaKnown RBP16.88■□□□□ 0.29
SCARF1-201ENST00000263071 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-201ENST00000263071 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
SCARF1-201ENST00000263071 RPAP2Q8IXW5 612 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-201ENST00000263071 FOSBP53539 338 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 364.3 ms