RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
CDH1-201ENST00000261769 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
CDH1-201ENST00000261769 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 NEK4P51957 841 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 CYP46A1Q9Y6A2 500 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 ABCC1P33527 1531 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 RARSP54136 660 aaKnown RBP16.62■□□□□ 0.25
CDH1-201ENST00000261769 RABEP1Q15276 862 aa16.62■□□□□ 0.25
CDH1-201ENST00000261769 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 ADGRL2O95490 1459 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 IP6K1Q92551 441 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
CDH1-201ENST00000261769 KRT32Q14532 448 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
CDH1-201ENST00000261769 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
CDH1-201ENST00000261769 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 MAP3K12Q12852 859 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 ARHGEF10O15013 1369 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 FOSBP53539 338 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 POLKQ9UBT6 870 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
CDH1-201ENST00000261769 MAGI2Q86UL8 1455 aa16.6■□□□□ 0.25
CDH1-201ENST00000261769 SOGA3Q5TF21 947 aa16.59■□□□□ 0.25
CDH1-201ENST00000261769 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDH1-201ENST00000261769 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
CDH1-201ENST00000261769 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
CDH1-201ENST00000261769 FBLN1P23142 703 aa16.59■□□□□ 0.25
CDH1-201ENST00000261769 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
CDH1-201ENST00000261769 F6X3S4 739 aa16.58■□□□□ 0.25
CDH1-201ENST00000261769 POLD1P28340 1107 aa16.58■□□□□ 0.25
CDH1-201ENST00000261769 LDHAL6AQ6ZMR3 332 aa16.58■□□□□ 0.25
CDH1-201ENST00000261769 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.25
CDH1-201ENST00000261769 LDHCP07864 332 aa16.58■□□□□ 0.24
CDH1-201ENST00000261769 USP5P45974 858 aa16.58■□□□□ 0.24
CDH1-201ENST00000261769 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
CDH1-201ENST00000261769 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
CDH1-201ENST00000261769 ORAI2Q96SN7 254 aa16.58■□□□□ 0.24
CDH1-201ENST00000261769 ASXL1Q8IXJ9 1541 aa16.58■□□□□ 0.24
CDH1-201ENST00000261769 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 MAST1Q9Y2H9 1570 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 NKTRP30414 1462 aaKnown RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 PI4KAP2A4QPH2 592 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 TXLNAP40222 546 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 PI4KAP1Q8N8J0 262 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 RTCBQ9Y3I0 505 aaKnown RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 FAM83GA6ND36 823 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
CDH1-201ENST00000261769 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
CDH1-201ENST00000261769 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
CDH1-201ENST00000261769 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 CDKL5O76039 1030 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
CDH1-201ENST00000261769 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
CDH1-201ENST00000261769 YEATS2Q9ULM3 1422 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
CDH1-201ENST00000261769 CDK5RAP3Q96JB5 506 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
CDH1-201ENST00000261769 ZFYVE9O95405 1425 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 ATP2B1P20020 1258 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 HOXC9P31274 260 aa16.55■□□□□ 0.24
CDH1-201ENST00000261769 MX1P20591 662 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 TESK2Q96S53 571 aa16.54■□□□□ 0.24
CDH1-201ENST00000261769 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 CWC27Q6UX04 472 aaKnown RBP16.53■□□□□ 0.24
CDH1-201ENST00000261769 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
CDH1-201ENST00000261769 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
CDH1-201ENST00000261769 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 SASS6Q6UVJ0 657 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
CDH1-201ENST00000261769 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 EYA1Q99502 592 aa16.53■□□□□ 0.24
CDH1-201ENST00000261769 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms