RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TATP17735 454 aaPredicted RBP35.11■■■■□ 3.21
CCM2-201ENST00000258781 SOS1Q07889 1333 aaPredicted RBP35.11■■■■□ 3.21
CCM2-201ENST00000258781 TAF7Q15545 349 aaPredicted RBP35.09■■■■□ 3.21
CCM2-201ENST00000258781 NWD2Q9ULI1 1742 aa35.09■■■■□ 3.21
CCM2-201ENST00000258781 LRP6O75581 1613 aa35.09■■■■□ 3.21
CCM2-201ENST00000258781 PDE4AP27815 886 aa35.09■■■■□ 3.21
CCM2-201ENST00000258781 OVOS2A0A0G2JMS6 1433 aa35.08■■■■□ 3.21
CCM2-201ENST00000258781 HDAC1Q13547 482 aaPredicted RBP35.07■■■■□ 3.21
CCM2-201ENST00000258781 AKAP4Q5JQC9 854 aa35.07■■■■□ 3.21
CCM2-201ENST00000258781 BACH2Q9BYV9 841 aa35.07■■■■□ 3.21
CCM2-201ENST00000258781 SLIT2O94813 1529 aa35.07■■■■□ 3.2
CCM2-201ENST00000258781 PLEKHG2Q9H7P9 1386 aa35.06■■■■□ 3.2
CCM2-201ENST00000258781 CACNA1FO60840 1977 aa35.06■■■■□ 3.2
CCM2-201ENST00000258781 USP35Q9P2H5 1018 aa35.06■■■■□ 3.2
CCM2-201ENST00000258781 KDM3BQ7LBC6 1761 aa35.05■■■■□ 3.2
CCM2-201ENST00000258781 PTPRCP08575 1304 aa35.05■■■■□ 3.2
CCM2-201ENST00000258781 SPATA31A6Q5VVP1 1343 aa35.05■■■■□ 3.2
CCM2-201ENST00000258781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.03■■■■□ 3.2
CCM2-201ENST00000258781 SHANK3Q9BYB0 1731 aa35.03■■■■□ 3.2
CCM2-201ENST00000258781 RGS12O14924 1447 aa35.02■■■■□ 3.2
CCM2-201ENST00000258781 ZBTB7BO15156 539 aaPredicted RBP35.02■■■■□ 3.2
CCM2-201ENST00000258781 C1orf141Q5JVX7 400 aa35.02■■■■□ 3.2
CCM2-201ENST00000258781 ADAMTS7Q9UKP4 1686 aa35.02■■■■□ 3.2
CCM2-201ENST00000258781 LGR6Q9HBX8 967 aa35.01■■■■□ 3.2
CCM2-201ENST00000258781 SPG7Q9UQ90 795 aa35.01■■■■□ 3.19
CCM2-201ENST00000258781 IL2RBP14784 551 aa35■■■■□ 3.19
CCM2-201ENST00000258781 MPRIPQ6WCQ1 1025 aa35■■■■□ 3.19
CCM2-201ENST00000258781 WNK3Q9BYP7 1800 aa35■■■■□ 3.19
CCM2-201ENST00000258781 RGS3P49796 1198 aa34.99■■■■□ 3.19
CCM2-201ENST00000258781 C8orf37Q96NL8 207 aa34.98■■■■□ 3.19
CCM2-201ENST00000258781 SCN11AQ9UI33 1791 aa34.98■■■■□ 3.19
CCM2-201ENST00000258781 INTS3Q68E01 1043 aaKnown RBP34.97■■■■□ 3.19
CCM2-201ENST00000258781 CYP27B1O15528 508 aa34.97■■■■□ 3.19
CCM2-201ENST00000258781 PHKG2P15735 406 aa34.97■■■■□ 3.19
CCM2-201ENST00000258781 SLC4A2P04920 1241 aa34.95■■■■□ 3.19
CCM2-201ENST00000258781 DISP2A7MBM2 1401 aa34.95■■■■□ 3.19
CCM2-201ENST00000258781 SIPA1L3O60292 1781 aaPredicted RBP34.94■■■■□ 3.18
CCM2-201ENST00000258781 KDM6AO15550 1401 aaPredicted RBP34.94■■■■□ 3.18
CCM2-201ENST00000258781 RNMTO43148 476 aaKnown RBP34.94■■■■□ 3.18
CCM2-201ENST00000258781 CCDC30Q5VVM6 783 aa34.94■■■■□ 3.18
CCM2-201ENST00000258781 PDZRN3Q9UPQ7 1066 aa34.94■■■■□ 3.18
CCM2-201ENST00000258781 STK31Q9BXU1 1019 aa34.93■■■■□ 3.18
CCM2-201ENST00000258781 BCL9LQ86UU0 1499 aa34.93■■■■□ 3.18
CCM2-201ENST00000258781 IFNL2Q8IZJ0 200 aa34.92■■■■□ 3.18
CCM2-201ENST00000258781 TEFQ10587 303 aa34.92■■■■□ 3.18
CCM2-201ENST00000258781 FAM161AQ3B820 660 aa34.92■■■■□ 3.18
CCM2-201ENST00000258781 ZCRB1Q8TBF4 217 aaKnown RBP34.92■■■■□ 3.18
CCM2-201ENST00000258781 NGLY1Q96IV0 654 aa34.92■■■■□ 3.18
CCM2-201ENST00000258781 SMC5Q8IY18 1101 aa34.91■■■■□ 3.18
CCM2-201ENST00000258781 SPATA31A1Q5TZJ5 1347 aa34.9■■■■□ 3.18
CCM2-201ENST00000258781 PCDH11XQ9BZA7 1347 aa34.89■■■■□ 3.18
CCM2-201ENST00000258781 PCDH11YQ9BZA8 1340 aa34.89■■■■□ 3.18
CCM2-201ENST00000258781 HOXB7P09629 217 aa34.88■■■■□ 3.17
CCM2-201ENST00000258781 UNC5CLQ8IV45 518 aa34.88■■■■□ 3.17
CCM2-201ENST00000258781 FNBP4Q8N3X1 1017 aaPredicted RBP34.87■■■■□ 3.17
CCM2-201ENST00000258781 CHMP4AQ9BY43 222 aa34.86■■■■□ 3.17
CCM2-201ENST00000258781 SPATA31A5Q5VU36 1347 aa34.86■■■■□ 3.17
CCM2-201ENST00000258781 SPATA31A7Q8IWB4 1347 aa34.86■■■■□ 3.17
CCM2-201ENST00000258781 N4BP2Q86UW6 1770 aaPredicted RBP34.86■■■■□ 3.17
CCM2-201ENST00000258781 EIF4A1P60842 406 aaKnown RBP34.86■■■■□ 3.17
CCM2-201ENST00000258781 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.86■■■■□ 3.17
CCM2-201ENST00000258781 C8orf34Q49A92 452 aa34.84■■■■□ 3.17
CCM2-201ENST00000258781 ANP32AP39687 249 aaKnown RBP34.84■■■■□ 3.17
CCM2-201ENST00000258781 G2E3Q7L622 706 aa34.84■■■■□ 3.17
CCM2-201ENST00000258781 BTBD11A6QL63 1104 aa34.83■■■■□ 3.17
CCM2-201ENST00000258781 DCAF5Q96JK2 942 aa34.82■■■■□ 3.16
CCM2-201ENST00000258781 MRC1P22897 1456 aa34.82■■■■□ 3.16
CCM2-201ENST00000258781 DDX54Q8TDD1 881 aaKnown RBP34.81■■■■□ 3.16
CCM2-201ENST00000258781 CCDC9Q9Y3X0 531 aaKnown RBP34.81■■■■□ 3.16
CCM2-201ENST00000258781 MEX3CQ5U5Q3 659 aaKnown RBP34.8■■■■□ 3.16
CCM2-201ENST00000258781 THRAP3Q9Y2W1 955 aaKnown RBP34.8■■■■□ 3.16
CCM2-201ENST00000258781 CCT4P50991 539 aaKnown RBP34.8■■■■□ 3.16
CCM2-201ENST00000258781 HDGFL1Q5TGJ6 251 aa34.8■■■■□ 3.16
CCM2-201ENST00000258781 HSP90AB1P08238 724 aaKnown RBP34.79■■■■□ 3.16
CCM2-201ENST00000258781 FLIIQ13045 1269 aa34.79■■■■□ 3.16
CCM2-201ENST00000258781 C1orf115Q9H7X2 142 aa34.79■■■■□ 3.16
CCM2-201ENST00000258781 USP21Q9UK80 565 aa34.78■■■■□ 3.16
CCM2-201ENST00000258781 TOGARAM1Q9Y4F4 1720 aa34.78■■■■□ 3.16
CCM2-201ENST00000258781 GCC1Q96CN9 775 aa34.78■■■■□ 3.16
CCM2-201ENST00000258781 VPS72Q15906 364 aa34.77■■■■□ 3.16
CCM2-201ENST00000258781 SLC52A2Q9HAB3 445 aa34.77■■■■□ 3.16
CCM2-201ENST00000258781 PXDNLA1KZ92 1463 aa34.77■■■■□ 3.16
CCM2-201ENST00000258781 TNS2Q63HR2 1409 aa34.76■■■■□ 3.15
CCM2-201ENST00000258781 KCNQ3O43525 872 aa34.75■■■■□ 3.15
CCM2-201ENST00000258781 NKX1-1Q15270 411 aaPredicted RBP34.75■■■■□ 3.15
CCM2-201ENST00000258781 NUCB1Q02818 461 aa34.75■■■■□ 3.15
CCM2-201ENST00000258781 SIRT2Q8IXJ6 389 aa34.74■■■■□ 3.15
CCM2-201ENST00000258781 HEG1Q9ULI3 1381 aa34.74■■■■□ 3.15
CCM2-201ENST00000258781 NFATC2IPQ8NCF5 419 aa34.73■■■■□ 3.15
CCM2-201ENST00000258781 NECTIN2Q92692 538 aa34.73■■■■□ 3.15
CCM2-201ENST00000258781 ATP10DQ9P241 1426 aa34.73■■■■□ 3.15
CCM2-201ENST00000258781 BARGINQ6ZT62 677 aa34.73■■■■□ 3.15
CCM2-201ENST00000258781 FKBP5Q13451 457 aaPredicted RBP34.72■■■■□ 3.15
CCM2-201ENST00000258781 CDCA7Q9BWT1 371 aaPredicted RBP34.72■■■■□ 3.15
CCM2-201ENST00000258781 AFF2P51816 1311 aa34.72■■■■□ 3.15
CCM2-201ENST00000258781 F6X3S4 739 aa34.71■■■■□ 3.15
CCM2-201ENST00000258781 EXOC5O00471 708 aa34.7■■■■□ 3.15
CCM2-201ENST00000258781 MSH5O43196 834 aa34.69■■■■□ 3.14
CCM2-201ENST00000258781 SLC4A10Q6U841 1118 aa34.69■■■■□ 3.14
CCM2-201ENST00000258781 RPAP2Q8IXW5 612 aaPredicted RBP34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms