RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
NOTCH2-201ENST00000256646 WDR33Q9C0J8 1336 aaKnown RBP11.63□□□□□ -0.55
NOTCH2-201ENST00000256646 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 CASQ1P31415 396 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 COMMD10Q9Y6G5 202 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 ZPR1O75312 459 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 GPTP24298 496 aa11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
NOTCH2-201ENST00000256646 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 PANK2Q9BZ23 570 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 DZIP1Q86YF9 867 aaKnown RBP11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 IMMTQ16891 758 aaKnown RBP11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 ZSCAN25Q6NSZ9 544 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 CBX1P83916 185 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 GSTTP1A0A1W2PQM5 241 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 BIN1O00499 593 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 DESP17661 470 aa11.61□□□□□ -0.55
NOTCH2-201ENST00000256646 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 RNF187Q5TA31 235 aaPredicted RBP11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 ZNF397Q8NF99 534 aaPredicted RBP11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 MCM2P49736 904 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 CACNA2D4Q7Z3S7 1137 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 CCDC148Q8NFR7 591 aa11.6□□□□□ -0.55
NOTCH2-201ENST00000256646 GOLGA6L7A0A1B0GV03 622 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 CDKL5O76039 1030 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 PRPF4BQ13523 1007 aaKnown RBP11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 TSHZ3Q63HK5 1081 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 EIF3JO75822 258 aaKnown RBP11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 IFFO1Q0D2I5 559 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 CCDC91Q7Z6B0 441 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
NOTCH2-201ENST00000256646 F6X3S4 739 aa11.58□□□□□ -0.55
NOTCH2-201ENST00000256646 TNIP1Q15025 636 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 SPA17Q15506 151 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 FERMT2Q96AC1 680 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 GDPD2Q9HCC8 539 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 TMCO5BA8MYB1 307 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 ERLIN1O75477 346 aa11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
NOTCH2-201ENST00000256646 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 HAND2P61296 217 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 DRC1Q96MC2 740 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 ZNF354CQ86Y25 554 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 HSP90AA4PQ58FG1 418 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 SAMM50Q9Y512 469 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 CTNNA2P26232 953 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 GIMAP7Q8NHV1 300 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 TSG101Q99816 390 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 NAPBQ9H115 298 aa11.57□□□□□ -0.56
NOTCH2-201ENST00000256646 WAPLQ7Z5K2 1190 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 LUZP1Q86V48 1076 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 ATP2C2O75185 946 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 URI1O94763 535 aaPredicted RBP11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 CAVIN4Q5BKX8 364 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 RGS22Q8NE09 1264 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 MYOM3Q5VTT5 1437 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 DUSP27Q5VZP5 1158 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 IQCEQ6IPM2 695 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 GNAT3A8MTJ3 354 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 ZSWIM4Q9H7M6 989 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 SMC1AQ14683 1233 aaKnown RBP11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 TDRD12Q587J7 1177 aaKnown RBP11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
NOTCH2-201ENST00000256646 NLRP5P59047 1200 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 CTNNA3Q9UI47 895 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 STARD3NLO95772 234 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 CEP131Q9UPN4 1083 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 IFIT1P09914 478 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms